| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00034218m |
| Family | GT8 |
| Protein Properties | Length: 627 Molecular Weight: 71915.2 Isoelectric Point: 7.6327 |
| Chromosome | Chromosome/Scaffold: 027342 Start: 181 End: 5202 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 296 | 598 | 0 |
| CLNMRLTVEYFKSAPLDPDDSPAHKFNIPEHRHYVILSKNVLASSVVINSTVSSCEDTENVVFHILTDAQNFYAMKHWFARNSYRESAVDVINYEQIIFE NFPEFGTQLLYLPEEFRVFISSLERPTEKSRMEYLSVFSHSHFFVPEIFKDLRKVIILDDDVVVQRDLSFLWNLDMGDKVNGAVRFCGLKLGQLRNLLGR TMYDPQSCAWMSGVNVIDLDKWREHNVTENYLQLLRKFGNSDDEASLRAAALPLSLLSFQHLLYPLDERLTLSGLGYDYGIKEEVAQSSTSLHYNGNMKP WLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MKATAPPAKR RRGPRLAVLA LVFCSLLVPI AFLFNRFPAV YVTDERPQQE IDLPSSGRFG 60 FEIGGSVNED SSNKISRSSK DSHNVIGDHS SSVSTKPKVL PPPKIEQSVL PPPKVEQPKP 120 EVKPVPLPVQ QAEGDRVNIR SRRVQNADEV EKAKACQLEF GSYCLWSIEH KEVMRDAVVK 180 RLKDQLFVAR SYYPSIAKLK GKEALTRELK QNIQEHERVL SESIVDADLP SFIKKKIERM 240 DQSIARAKSC TVDCNNVDRK LRQILHMTED EAHFHMKQSA YLYNLGVHTM PKSHHCLNMR 300 LTVEYFKSAP LDPDDSPAHK FNIPEHRHYV ILSKNVLASS VVINSTVSSC EDTENVVFHI 360 LTDAQNFYAM KHWFARNSYR ESAVDVINYE QIIFENFPEF GTQLLYLPEE FRVFISSLER 420 PTEKSRMEYL SVFSHSHFFV PEIFKDLRKV IILDDDVVVQ RDLSFLWNLD MGDKVNGAVR 480 FCGLKLGQLR NLLGRTMYDP QSCAWMSGVN VIDLDKWREH NVTENYLQLL RKFGNSDDEA 540 SLRAAALPLS LLSFQHLLYP LDERLTLSGL GYDYGIKEEV AQSSTSLHYN GNMKPWLELG 600 IPDYRKYWKR FLARDERFMD ECNVSP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06429 | GT8_like_1 | 4.0e-82 | 328 | 612 | 285 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02718 | PLN02718 | 4.0e-84 | 172 | 624 | 462 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 1.0e-84 | 161 | 625 | 482 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 9.0e-102 | 173 | 626 | 468 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 1 | 625 | 638 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89863.1 | 0 | 1 | 624 | 1 | 629 | hypothetical protein OsI_11412 [Oryza sativa Indica Group] |
| GenBank | EAZ26795.1 | 0 | 1 | 624 | 1 | 629 | hypothetical protein OsJ_10706 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050007.1 | 0 | 1 | 626 | 1 | 631 | Os03g0330000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151802.1 | 0 | 1 | 626 | 1 | 629 | transferase, transferring glycosyl groups [Zea mays] |
| RefSeq | XP_002465323.1 | 0 | 1 | 626 | 1 | 628 | hypothetical protein SORBIDRAFT_01g036430 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.0005 | 427 | 522 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.001 | 427 | 522 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.001 | 427 | 522 | 76 | 169 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
