Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00034423m |
Family | GT14 |
Protein Properties | Length: 242 Molecular Weight: 26847.6 Isoelectric Point: 8.9142 |
Chromosome | Chromosome/Scaffold: 032791 Start: 6038 End: 6998 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 2 | 139 | 0 |
LQVFSTVPRNVNFIEHTGYLGWKEGQRARPLIVDPGLYGSKKQDIFWASPKRDLPTAFKLFTGSAWVALSRDFVEYTVWGWDNLPRTLLMYYANFVSSPE GYFQTLVCNAPRFVRTVANHDLHHIQWDVPPRQHPHAL |
Full Sequence |
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Protein Sequence Length: 242 Download |
ILQVFSTVPR NVNFIEHTGY LGWKEGQRAR PLIVDPGLYG SKKQDIFWAS PKRDLPTAFK 60 LFTGSAWVAL SRDFVEYTVW GWDNLPRTLL MYYANFVSSP EGYFQTLVCN APRFVRTVAN 120 HDLHHIQWDV PPRQHPHALA LADLPAMVRS GAPFARKFPR DDPVLDAIDA ELLGRPPPAR 180 PGGGNGTAPA AFAPGGWCGG DATCGAVDND WVLRPGPGAE RFQRLIERIV RSEAFLNRQC 240 K* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 7.0e-33 | 1 | 134 | 137 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 6.0e-110 | 1 | 241 | 241 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF87198.1 | 0 | 1 | 241 | 230 | 463 | unknown [Zea mays] |
DDBJ | BAH01648.1 | 0 | 1 | 241 | 239 | 480 | unnamed protein product [Oryza sativa Japonica Group] |
RefSeq | NP_001148073.1 | 0 | 1 | 235 | 230 | 457 | xylosyltransferase oxt [Zea mays] |
RefSeq | XP_002457166.1 | 0 | 1 | 241 | 252 | 490 | hypothetical protein SORBIDRAFT_03g002590 [Sorghum bicolor] |
RefSeq | XP_002457167.1 | 0 | 1 | 241 | 256 | 496 | hypothetical protein SORBIDRAFT_03g002600 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL867621 | 222 | 21 | 242 | 0 |
FL861639 | 194 | 51 | 242 | 0 |
GH721256 | 172 | 1 | 172 | 0 |
EG379202 | 218 | 27 | 242 | 0 |
FD736456 | 247 | 1 | 242 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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