Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035055m |
Family | GT31 |
Protein Properties | Length: 307 Molecular Weight: 34664.3 Isoelectric Point: 6.8324 |
Chromosome | Chromosome/Scaffold: 097013 Start: 1154 End: 3685 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 51 | 247 | 0 |
KRRDSVRETWMPQGDKLKKLEEEKGIILRFTIGHSATSNNVLDKAIDAEDEIHHDFLRLDHVEGYHKLSAKTKIFFSTAVALWDADFYVKVDDDVHLNLG MLVATLGRHKLKPRVYIGCMKSGPVLSDKNAKYHEPEFWKFGEDGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLDVEHID |
Full Sequence |
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Protein Sequence Length: 307 Download |
YLEKSIDTLQ MELAAKRSSN ELHGESAGDI SKQRKRAFVV IGINTAFSSR KRRDSVRETW 60 MPQGDKLKKL EEEKGIILRF TIGHSATSNN VLDKAIDAED EIHHDFLRLD HVEGYHKLSA 120 KTKIFFSTAV ALWDADFYVK VDDDVHLNLG MLVATLGRHK LKPRVYIGCM KSGPVLSDKN 180 AKYHEPEFWK FGEDGNKYFR HATGQIYAIS KDLATYISIN QPILHKYANE DVSLGAWFIG 240 LDVEHIDDRD MCCGTPPDCE WKAQAGNVCV ASFDWKCSGV CNPVERLKYV HSRCSEGEDA 300 IWSASF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13334 | DUF4094 | 0.002 | 1 | 19 | 19 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
PLN03133 | PLN03133 | 6.0e-6 | 34 | 248 | 227 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam01762 | Galactosyl_T | 3.0e-52 | 51 | 249 | 205 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 2 | 306 | 312 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79671.1 | 0 | 2 | 306 | 90 | 398 | unknown [Zea mays] |
RefSeq | NP_001063339.1 | 0 | 1 | 306 | 89 | 393 | Os09g0452900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131318.1 | 0 | 2 | 306 | 90 | 398 | hypothetical protein LOC100192632 [Zea mays] |
RefSeq | NP_001141890.1 | 0 | 1 | 306 | 93 | 398 | hypothetical protein LOC100274035 [Zea mays] |
RefSeq | XP_002462477.1 | 0 | 2 | 306 | 107 | 410 | hypothetical protein SORBIDRAFT_02g026360 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG876239 | 259 | 49 | 307 | 0 |
GO871487 | 306 | 2 | 304 | 0 |
JK592865 | 246 | 49 | 294 | 0 |
CK268505 | 274 | 34 | 307 | 0 |
HS560505 | 258 | 34 | 291 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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