Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035093m |
Family | GT8 |
Protein Properties | Length: 493 Molecular Weight: 57009.1 Isoelectric Point: 9.9999 |
Chromosome | Chromosome/Scaffold: 093738 Start: 1359 End: 3698 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 154 | 464 | 0 |
CLALRLTNEYYSSSTNKKQFPYEERFEDPNLQHYALFSDNVLAAAVVVNSTHINAKNPASHVFHIVTDKHNYAAMRMWFLANPIGETAVQVQNIADFLWL NSSYSPVLKQLESHFMINYYFNTNQDKPGKNPKFQNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLSYLWSINLKGKVNGAVHTCGETFHRFD RYLNFSNPLIAKKFDRRACGWAYGMNVFDLSEWRKQNITGVYHYWQNLNANRQLWKLGTLPAGLVTFWNHTFPLDRSWHLLGLGYKPNVNQRDVERAAVI HYNGNRKPWLE |
Full Sequence |
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Protein Sequence Length: 493 Download |
EISVDRSSEQ FRGGTSKEPD AKAVSTSHHT SQQPDAMIRV IKNQLRTSKT YIGLLPSRGR 60 HAFVRDLRRK MRDIQQALGD ATSDKRLPKN VDGKIRAMEL TLAKIKQVHD NCAAIIDKLL 120 ATLHSTEDQV EAQKQKANYV AQIAAKAIPK RLYCLALRLT NEYYSSSTNK KQFPYEERFE 180 DPNLQHYALF SDNVLAAAVV VNSTHINAKN PASHVFHIVT DKHNYAAMRM WFLANPIGET 240 AVQVQNIADF LWLNSSYSPV LKQLESHFMI NYYFNTNQDK PGKNPKFQNP KYLSILNHLR 300 FYLPEIFPKL NKVLFLDDDI VVQKDLSYLW SINLKGKVNG AVHTCGETFH RFDRYLNFSN 360 PLIAKKFDRR ACGWAYGMNV FDLSEWRKQN ITGVYHYWQN LNANRQLWKL GTLPAGLVTF 420 WNHTFPLDRS WHLLGLGYKP NVNQRDVERA AVIHYNGNRK PWLEIGLPVY RQFWSKYVNF 480 DNVYLRECNI NP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 3.0e-177 | 85 | 492 | 413 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 18 | 492 | 477 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 29 | 491 | 467 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 34 | 490 | 465 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 35 | 490 | 459 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD10126.1 | 0 | 3 | 492 | 211 | 726 | glycosyltransferase family-like [Oryza sativa Japonica Group] |
EMBL | CAJ19325.1 | 0 | 1 | 492 | 206 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
EMBL | CAJ75629.1 | 0 | 1 | 492 | 1 | 501 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
GenBank | EEE68930.1 | 0 | 3 | 492 | 208 | 723 | hypothetical protein OsJ_27797 [Oryza sativa Japonica Group] |
RefSeq | XP_002460421.1 | 0 | 17 | 492 | 222 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795725 | 455 | 39 | 493 | 0 |
JG890961 | 275 | 184 | 458 | 0 |
DW237421 | 315 | 152 | 466 | 0 |
FL971577 | 253 | 103 | 355 | 0 |
GO877937 | 286 | 208 | 493 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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