y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035094m |
Family | GT8 |
Protein Properties | Length: 458 Molecular Weight: 53136.6 Isoelectric Point: 10.1629 |
Chromosome | Chromosome/Scaffold: 093738 Start: 1359 End: 3698 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 154 | 429 | 3.4e-37 |
CLALRLTNEYYSSSTNKKQFPYEERFEDPNLQHYALFSDNVLAAAVVVNSTHINAKNPASHVFHIVTDKHNYAAMRMWFLANPIGETAVQVQNIADFLWL NSSYSPVLKQLESHFMINYYFNTNQDKPGKNPKFQNPKYLSILNHLRFYLPEIFPKLNKTFHRFDRYLNFSNPLIAKKFDRRACGWAYGMNVFDLSEWRK QNITGVYHYWQNLNANRQLWKLGTLPAGLVTFWNHTFPLDRSWHLLGLGYKPNVNQRDVERAAVIHYNGNRKPWLE |
Full Sequence |
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Protein Sequence Length: 458 Download |
EISVDRSSEQ FRGGTSKEPD AKAVSTSHHT SQQPDAMIRV IKNQLRTSKT YIGLLPSRGR 60 HAFVRDLRRK MRDIQQALGD ATSDKRLPKN VDGKIRAMEL TLAKIKQVHD NCAAIIDKLL 120 ATLHSTEDQV EAQKQKANYV AQIAAKAIPK RLYCLALRLT NEYYSSSTNK KQFPYEERFE 180 DPNLQHYALF SDNVLAAAVV VNSTHINAKN PASHVFHIVT DKHNYAAMRM WFLANPIGET 240 AVQVQNIADF LWLNSSYSPV LKQLESHFMI NYYFNTNQDK PGKNPKFQNP KYLSILNHLR 300 FYLPEIFPKL NKTFHRFDRY LNFSNPLIAK KFDRRACGWA YGMNVFDLSE WRKQNITGVY 360 HYWQNLNANR QLWKLGTLPA GLVTFWNHTF PLDRSWHLLG LGYKPNVNQR DVERAAVIHY 420 NGNRKPWLEI GLPVYRQFWS KYVNFDNVYL RECNINP* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 7.0e-148 | 85 | 457 | 413 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 3.0e-155 | 35 | 455 | 459 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 1.0e-156 | 34 | 455 | 465 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 7.0e-173 | 29 | 456 | 467 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 18 | 457 | 477 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD10126.1 | 0 | 3 | 457 | 211 | 726 | glycosyltransferase family-like [Oryza sativa Japonica Group] |
EMBL | CAJ19325.1 | 0 | 1 | 457 | 206 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
EMBL | CAJ26362.1 | 0 | 24 | 457 | 224 | 689 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
EMBL | CAJ75629.1 | 0 | 1 | 457 | 1 | 501 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
RefSeq | XP_002460421.1 | 0 | 17 | 457 | 222 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795725 | 455 | 39 | 458 | 0 |
JG890961 | 275 | 184 | 423 | 0 |
FL966278 | 225 | 234 | 458 | 0 |
FL971577 | 253 | 103 | 320 | 0 |
GD001580 | 267 | 109 | 340 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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