Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035248m |
Family | GH5 |
Protein Properties | Length: 312 Molecular Weight: 34718.3 Isoelectric Point: 4.654 |
Chromosome | Chromosome/Scaffold: 095368 Start: 2104 End: 3793 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 54 | 308 | 2.7e-27 |
PYVVHGFNTYWLMYFAADPATRPTVTAALAEAADAGLNVCRTWAFNDGGSRALQLKPFSYDEEVFQALDFVINYGGKAQYVRWGKEAGLYLTSDDDFFTD PTIKTVLTRINTITNGAYKDDPTILAWELINEPRCHSDPSGDALQAWIEEMASYVKSIDPVHLLEIGVEGFYGPSTPELLHVNPDAYSGTVGTDFIRNHR ALGIDLASIHIYSDTWLPHSVEDSHLQFVNTWMQQHIDDAANLLGMPILIGEFGV |
Full Sequence |
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Protein Sequence Length: 312 Download |
MCRPHVAPPL SATPRVSLLH CILLATCISV MPPDADEWAV VERRGLHLLE SRRPYVVHGF 60 NTYWLMYFAA DPATRPTVTA ALAEAADAGL NVCRTWAFND GGSRALQLKP FSYDEEVFQA 120 LDFVINYGGK AQYVRWGKEA GLYLTSDDDF FTDPTIKTVL TRINTITNGA YKDDPTILAW 180 ELINEPRCHS DPSGDALQAW IEEMASYVKS IDPVHLLEIG VEGFYGPSTP ELLHVNPDAY 240 SGTVGTDFIR NHRALGIDLA SIHIYSDTWL PHSVEDSHLQ FVNTWMQQHI DDAANLLGMP 300 ILIGEFGVSL KD |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.001 | 169 | 221 | 62 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 1.0e-6 | 110 | 312 | 215 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 6.0e-21 | 128 | 309 | 182 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH95489.1 | 0 | 38 | 312 | 9 | 310 | Os12g0117250 [Oryza sativa Japonica Group] |
GenBank | EEC67554.1 | 0 | 38 | 312 | 9 | 307 | hypothetical protein OsI_34887 [Oryza sativa Indica Group] |
GenBank | EEE52650.1 | 0 | 38 | 312 | 9 | 310 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
Swiss-Prot | Q2RBB1 | 0 | 38 | 312 | 9 | 307 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
RefSeq | XP_002450155.1 | 0 | 31 | 311 | 1 | 311 | hypothetical protein SORBIDRAFT_05g001260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 45 | 311 | 11 | 298 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 6e-34 | 44 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 6e-34 | 44 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 6e-34 | 44 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 6e-34 | 44 | 308 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |