| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00035379m |
| Family | GT48 |
| Protein Properties | Length: 379 Molecular Weight: 43675.8 Isoelectric Point: 10.4047 |
| Chromosome | Chromosome/Scaffold: 098730 Start: 1190 End: 3121 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1 | 234 | 0 |
| MALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFADNYRLYSRSHFVKGIELMILLVVYEIFGQ SYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAPEKSWESWWDKEQEPLRHSGKRGTIVEILLALRFFIYQYGL VYHLHITKKITKDNSVLVYCFSWVVIFVILLIMK | |||
| Full Sequence |
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| Protein Sequence Length: 379 Download |
| MALPMMMEIG LERGFRTALS DFVLMQLQLA SVFFTFSLGT KTHYYGRTLL HGGAEYRATG 60 RGFVVFHAKF ADNYRLYSRS HFVKGIELMI LLVVYEIFGQ SYRGAITYIF ITVSMWFMVG 120 TWLFAPFLFN PSGFEWQKIV DDWTDWHKWI SNRGGIGVAP EKSWESWWDK EQEPLRHSGK 180 RGTIVEILLA LRFFIYQYGL VYHLHITKKI TKDNSVLVYC FSWVVIFVIL LIMKTVSVGR 240 RRFSAEFQLV FRLIKGLIFI TFTSIVIILI AIPGMTVLDI FVCILAFMPT GWGLLLIAQA 300 IRPVIQKVGL WGSIKALARG YEILMGLLLF TPIAFLAWFP FVSEFQTRML FNQAFSRGLQ 360 ISRILGGHKK DRATRNKE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02364 | Glucan_synthase | 8.0e-47 | 2 | 230 | 251 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC74308.1 | 0 | 1 | 378 | 1138 | 1512 | hypothetical protein OsI_09576 [Oryza sativa Indica Group] |
| GenBank | EEC81348.1 | 0 | 1 | 378 | 1350 | 1724 | hypothetical protein OsI_24536 [Oryza sativa Indica Group] |
| GenBank | EEE66395.1 | 0 | 1 | 378 | 1608 | 1982 | hypothetical protein OsJ_22734 [Oryza sativa Japonica Group] |
| RefSeq | NP_001048628.1 | 0 | 1 | 378 | 534 | 908 | Os02g0832500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001058646.1 | 0 | 1 | 378 | 1498 | 1872 | Os06g0728800 [Oryza sativa (japonica cultivar-group)] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
| Transmembrane Domains | ||||
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| Start | End | |||
| 107 | 129 | |||
| 184 | 206 | |||
| 216 | 238 | |||
| 250 | 272 | |||
| 277 | 299 | |||
| 320 | 342 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FE652547 | 258 | 5 | 261 | 0 |
| HO760800 | 309 | 57 | 365 | 0 |
| GT833946 | 268 | 46 | 313 | 0 |
| GT049225 | 319 | 9 | 327 | 0 |
| DT947668 | 247 | 1 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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