| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00035631m |
| Family | GH116 |
| Protein Properties | Length: 451 Molecular Weight: 51125.9 Isoelectric Point: 4.6306 |
| Chromosome | Chromosome/Scaffold: 093213 Start: 696 End: 3910 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 119 | 446 | 0 |
| GQFLYLEGIEYYMWNTYDVHFYASFSLVMLFPKLQLSVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGAVPHDLGLYDPWFKVNAYTLYNTDRWKDLNP KFVLQVYRDVVATGDKSFARAVWPSVYMAMAYMEQFDKDKDGMIENEDFPDQTYDVWSMAGISAYCGGLWVAALQAASALAREVGDKASEKLFWDKYEKA KSVYSKLWNGSYFNYDDGENKMSTSIQADQLAGQWYGKACGLFPIVDKDKAQSALERIYSFNVMKFKDGKRGAMNGMWPDGTLDMSAMQSREIWPGVTYA LAATMIQEGMVEQGFKTAEGIYHAAWSP | |||
| Full Sequence |
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| Protein Sequence Length: 451 Download |
| MEHTSWERLI EEWQDPILQD KRFPAWYPVT LFNELYYLNA GGTIWTDGLP PIQSLTGIGG 60 KQFSLDMLND DDVNEMVQQN NTASDILNRM ASVLERMHAS IASNSAIGTT LLHGEENIGQ 120 FLYLEGIEYY MWNTYDVHFY ASFSLVMLFP KLQLSVQRDF AAAVMMHDPE KLRILHDGKW 180 AARKVLGAVP HDLGLYDPWF KVNAYTLYNT DRWKDLNPKF VLQVYRDVVA TGDKSFARAV 240 WPSVYMAMAY MEQFDKDKDG MIENEDFPDQ TYDVWSMAGI SAYCGGLWVA ALQAASALAR 300 EVGDKASEKL FWDKYEKAKS VYSKLWNGSY FNYDDGENKM STSIQADQLA GQWYGKACGL 360 FPIVDKDKAQ SALERIYSFN VMKFKDGKRG AMNGMWPDGT LDMSAMQSRE IWPGVTYALA 420 ATMIQEGMVE QGFKTAEGIY HAAWSPEGLG * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 0.003 | 6 | 47 | 42 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 5.0e-75 | 118 | 437 | 336 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 5.0e-151 | 119 | 449 | 335 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX95400.1 | 0 | 1 | 450 | 391 | 842 | At5g49900 [Oryza sativa Japonica Group] |
| GenBank | EEC67936.1 | 0 | 1 | 450 | 410 | 861 | hypothetical protein OsI_35656 [Oryza sativa Indica Group] |
| RefSeq | NP_001067588.1 | 0 | 1 | 450 | 410 | 861 | Os11g0242100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002450573.1 | 0 | 1 | 450 | 410 | 861 | hypothetical protein SORBIDRAFT_05g007160 [Sorghum bicolor] |
| RefSeq | XP_002528846.1 | 0 | 1 | 450 | 408 | 860 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GR335547 | 268 | 24 | 289 | 0 |
| CB622732 | 267 | 10 | 274 | 0 |
| FF354175 | 282 | 61 | 339 | 0 |
| DY292040 | 319 | 132 | 450 | 0 |
| CO522722 | 240 | 99 | 338 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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