Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035819m |
Family | AA1 |
Protein Properties | Length: 591 Molecular Weight: 65308.8 Isoelectric Point: 6.0019 |
Chromosome | Chromosome/Scaffold: 094340 Start: 540 End: 3316 |
Description | SKU5 similar 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 47 | 514 | 0 |
KVIGINGQFPGPPLNVTTNWNVVVNVRNALDEPLLLTWNGVQQRKTAWQDGVLGTNCAIPAGWNWTYAFQVKDQVGSFFYFPSTPLHRAAGGYGGITINN RDVIPIPFGFPDGDITLFIGDWYNRGHKELRRALDGGTLLGAPDGVLINGLGPYQYNTSLVPPGIVYERINVEPGKTYRFRVHNVGVSTSLNFRIQKHNL LLVETEGSYTSQQNYTNLDIHVGQSYSFLVTMDQNASTDYYVVASARFVGAAVVDKLTGVAILHYSNSQGPASGPLPDPPNDQYDTSFSINQARSIRWNV TAGGARPNPQGSFHYGDITVTDVYLLQSRLPELIDGKLCSTLNEISYIAPSTPLVLAQLFNVPGVYKLDFPNHPMNRLPKVDTSIINGTYKGFMEIIFQN NATSVQSYHLDGYAFFVVGMDYGLWTENSRGIYNKWDGVARSTIQVFPGAWTAVLVFLDNAGIWNLRV |
Full Sequence |
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Protein Sequence Length: 591 Download |
MPPPLLLLLL LLAASTAPAP ARAGDPYAYY DWEVSYVSAQ PLGVKQKVIG INGQFPGPPL 60 NVTTNWNVVV NVRNALDEPL LLTWNGVQQR KTAWQDGVLG TNCAIPAGWN WTYAFQVKDQ 120 VGSFFYFPST PLHRAAGGYG GITINNRDVI PIPFGFPDGD ITLFIGDWYN RGHKELRRAL 180 DGGTLLGAPD GVLINGLGPY QYNTSLVPPG IVYERINVEP GKTYRFRVHN VGVSTSLNFR 240 IQKHNLLLVE TEGSYTSQQN YTNLDIHVGQ SYSFLVTMDQ NASTDYYVVA SARFVGAAVV 300 DKLTGVAILH YSNSQGPASG PLPDPPNDQY DTSFSINQAR SIRWNVTAGG ARPNPQGSFH 360 YGDITVTDVY LLQSRLPELI DGKLCSTLNE ISYIAPSTPL VLAQLFNVPG VYKLDFPNHP 420 MNRLPKVDTS IINGTYKGFM EIIFQNNATS VQSYHLDGYA FFVVGMDYGL WTENSRGIYN 480 KWDGVARSTI QVFPGAWTAV LVFLDNAGIW NLRVQNLDTW YLGQEVYINV VNPEDNSSTL 540 PDNAIFCGAL SSLQKEQSHR FVYSEASPVA PWRNMVSFLF LLASFTTWLQ * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 2.0e-173 | 22 | 552 | 542 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 22 | 588 | 575 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 22 | 559 | 547 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 22 | 548 | 531 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 26 | 551 | 539 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN40384.1 | 0 | 21 | 559 | 20 | 560 | unknown [Picea sitchensis] |
EMBL | CBI35585.1 | 0 | 21 | 589 | 23 | 593 | unnamed protein product [Vitis vinifera] |
GenBank | EEE53691.1 | 0 | 21 | 583 | 24 | 567 | hypothetical protein OsJ_00004 [Oryza sativa Japonica Group] |
RefSeq | NP_001041735.1 | 0 | 21 | 583 | 24 | 591 | Os01g0100400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465266.1 | 0 | 22 | 588 | 22 | 588 | hypothetical protein SORBIDRAFT_01g035180 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 552 | 5 | 543 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 1asq_A | 0 | 29 | 552 | 5 | 543 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 1asp_B | 0 | 29 | 552 | 5 | 543 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 1asp_A | 0 | 29 | 552 | 5 | 543 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 1aso_B | 0 | 29 | 552 | 5 | 543 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |