y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00036679m |
Family | GH1 |
Protein Properties | Length: 367 Molecular Weight: 41648 Isoelectric Point: 9.2094 |
Chromosome | Chromosome/Scaffold: 091891 Start: 722 End: 2061 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 2 | 364 | 0 |
NPFVTIFHGDTPQALESKYQSFLSENIVQDYVDFAEVCFREFGDRVKFWTTFNEPLSVASQGYGTGVFAPGRCSPFISASCTPGDSGREPYVVTHHILLA HAAAVALYRARYQAAQRGQVGITLVSHWFVPNTDTAADRRAVQRSLDYMYGWYLGPLVHGKYPGTMTGFLGDRLPRFTPEQRRLVRGSYDFIGVNYYTTY STSARPAPDGPAQSYDGDILANTSGFRGGEPVGEPEFVPIFFNSPAGLRELLLYTKRRYNNPVIYVTENGIAEENSARIPLKKALKDGHRIKFHSQHLQF INHAIRDGVKVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKQSSYWIESFLKRNK |
Full Sequence |
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Protein Sequence Length: 367 Download |
LNPFVTIFHG DTPQALESKY QSFLSENIVQ DYVDFAEVCF REFGDRVKFW TTFNEPLSVA 60 SQGYGTGVFA PGRCSPFISA SCTPGDSGRE PYVVTHHILL AHAAAVALYR ARYQAAQRGQ 120 VGITLVSHWF VPNTDTAADR RAVQRSLDYM YGWYLGPLVH GKYPGTMTGF LGDRLPRFTP 180 EQRRLVRGSY DFIGVNYYTT YSTSARPAPD GPAQSYDGDI LANTSGFRGG EPVGEPEFVP 240 IFFNSPAGLR ELLLYTKRRY NNPVIYVTEN GIAEENSARI PLKKALKDGH RIKFHSQHLQ 300 FINHAIRDGV KVKGYFTWTF MDCFEWGDGY LDRFGLIFID RLNGLKRYRK QSSYWIESFL 360 KRNKTH* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 1.0e-68 | 1 | 365 | 375 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-69 | 1 | 361 | 364 | + beta-glucosidase | ||
TIGR03356 | BGL | 4.0e-70 | 3 | 355 | 360 | + beta-galactosidase. | ||
PLN02998 | PLN02998 | 2.0e-76 | 1 | 366 | 368 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 1.0e-96 | 3 | 364 | 365 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A3C053 | 0 | 1 | 364 | 130 | 493 | BGL29_ORYSJ RecName: Full=Beta-glucosidase 29; Short=Os9bglu29; Flags: Precursor |
GenBank | EAZ09573.1 | 0 | 3 | 363 | 143 | 500 | hypothetical protein OsI_31852 [Oryza sativa Indica Group] |
GenBank | EEC84793.1 | 0 | 1 | 364 | 144 | 511 | hypothetical protein OsI_31851 [Oryza sativa Indica Group] |
RefSeq | NP_001063538.1 | 0 | 1 | 364 | 141 | 504 | Os09g0490400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002462569.1 | 0 | 1 | 362 | 143 | 505 | hypothetical protein SORBIDRAFT_02g028400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 362 | 144 | 505 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3ptq_A | 0 | 1 | 362 | 144 | 505 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3ptm_B | 0 | 1 | 362 | 144 | 505 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3ptm_A | 0 | 1 | 362 | 144 | 505 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3ptk_B | 0 | 1 | 362 | 144 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE590590 | 364 | 1 | 364 | 0 |
FL720309 | 224 | 143 | 366 | 0 |
JG903945 | 221 | 142 | 362 | 0 |
FL856732 | 263 | 1 | 263 | 0 |
FE630001 | 255 | 18 | 272 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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