Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00036713m |
Family | AA6 |
Protein Properties | Length: 211 Molecular Weight: 22226.5 Isoelectric Point: 6.7938 |
Chromosome | Chromosome/Scaffold: 093123 Start: 818 End: 1631 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 5 | 202 | 0 |
KIYIVYYSTWGHVASLAEEIKKGADSVDGVEATIWQVAETLPEEVLGKMHAAAKKAEHPVISGKQLADADGLLFGFPARFGMMAAQMKALFDSTGGLWER QALAGKPAGFFFALGTQGGGQEETALTAVSQLTHHGMMFVPVGYTFGAGMFDMDEVRCCSPYGSGTFAGADGKSRKPSDAELQMAAHQGKYFATVAKK |
Full Sequence |
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Protein Sequence Length: 211 Download |
MAVTKIYIVY YSTWGHVASL AEEIKKGADS VDGVEATIWQ VAETLPEEVL GKMHAAAKKA 60 EHPVISGKQL ADADGLLFGF PARFGMMAAQ MKALFDSTGG LWERQALAGK PAGFFFALGT 120 QGGGQEETAL TAVSQLTHHG MMFVPVGYTF GAGMFDMDEV RCCSPYGSGT FAGADGKSRK 180 PSDAELQMAA HQGKYFATVA KKLKAGAAFV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 4.0e-11 | 8 | 140 | 145 | + Flavodoxin. | ||
pfam03358 | FMN_red | 1.0e-13 | 20 | 148 | 129 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 4.0e-40 | 1 | 205 | 212 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 1.0e-60 | 4 | 203 | 200 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 3.0e-72 | 4 | 205 | 202 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
GO:0050662 | coenzyme binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW78582.1 | 0 | 1 | 207 | 1 | 203 | quinone reductase 2 [Triticum monococcum] |
RefSeq | NP_001146036.1 | 0 | 2 | 210 | 3 | 211 | hypothetical protein LOC100279567 [Zea mays] |
RefSeq | XP_002452306.1 | 0 | 1 | 210 | 1 | 217 | hypothetical protein SORBIDRAFT_04g023400 [Sorghum bicolor] |
RefSeq | XP_002461308.1 | 0 | 4 | 206 | 3 | 204 | hypothetical protein SORBIDRAFT_02g000630 [Sorghum bicolor] |
RefSeq | XP_002461673.1 | 0 | 1 | 210 | 5 | 215 | hypothetical protein SORBIDRAFT_02g006210 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3b6m_B | 0 | 5 | 204 | 3 | 197 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3b6m_A | 0 | 5 | 204 | 3 | 197 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3b6k_B | 0 | 5 | 204 | 3 | 197 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3b6k_A | 0 | 5 | 204 | 3 | 197 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3b6j_B | 0 | 5 | 204 | 3 | 197 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE163971 | 203 | 2 | 204 | 0 |
EE164116 | 203 | 2 | 204 | 0 |
EE021789 | 203 | 2 | 204 | 0 |
BM348554 | 203 | 2 | 204 | 0 |
BM340759 | 193 | 12 | 204 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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