Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00036780m |
Family | GH17 |
Protein Properties | Length: 442 Molecular Weight: 45677.6 Isoelectric Point: 4.9349 |
Chromosome | Chromosome/Scaffold: 000882 Start: 968 End: 3079 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 41 | 351 | 0 |
IGVNYGTIADNLPPPASTASLLMSTSIGKLRLYEPQPELVAALAGSNISILLGIPNGDVPNLASSPAAAASWAAANIPTTVTVSAISVGNELLNSGDPTL APQLLPAMQNLLAALPAGSTTKISTVHSMAVLSASDPPSSGAFHSDLAGSLDPVLDFLHQNGAPFMINPYPYFAYASDTRPETLAFCLFQPNAGRVDAVS GLTYTNMFDAQLDAIRAALDAKGYGDVDIVVAETGWPYKGDADEAGATVDNAKAYISSLVAHLQSQAGTPRTPGKSVDTYIFALYDEDLKGGPESERSFG LYKTDLTANYD |
Full Sequence |
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Protein Sequence Length: 442 Download |
MSRRGARYVR ARCCCPRLHN CAYRCLLTTA SSGPSASQSF IGVNYGTIAD NLPPPASTAS 60 LLMSTSIGKL RLYEPQPELV AALAGSNISI LLGIPNGDVP NLASSPAAAA SWAAANIPTT 120 VTVSAISVGN ELLNSGDPTL APQLLPAMQN LLAALPAGST TKISTVHSMA VLSASDPPSS 180 GAFHSDLAGS LDPVLDFLHQ NGAPFMINPY PYFAYASDTR PETLAFCLFQ PNAGRVDAVS 240 GLTYTNMFDA QLDAIRAALD AKGYGDVDIV VAETGWPYKG DADEAGATVD NAKAYISSLV 300 AHLQSQAGTP RTPGKSVDTY IFALYDEDLK GGPESERSFG LYKTDLTANY DAGLAKSGGT 360 AAPTILTPSP PQGTLQPSRG ATPMGFCQTT ATVPGSTQGQ QVPLSSSCYI PAGAVSRQAD 420 AGTWQLVWFG VLLCLAMVAG M* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-12 | 122 | 345 | 228 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-83 | 41 | 351 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94756.1 | 0 | 37 | 438 | 26 | 423 | Glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC74801.1 | 0 | 37 | 438 | 26 | 436 | hypothetical protein OsI_10603 [Oryza sativa Indica Group] |
RefSeq | NP_001049445.1 | 0 | 29 | 438 | 34 | 452 | Os03g0227400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147326.1 | 0 | 35 | 441 | 24 | 427 | LOC100280934 [Zea mays] |
RefSeq | XP_002468213.1 | 0 | 37 | 439 | 28 | 430 | hypothetical protein SORBIDRAFT_01g041880 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 41 | 355 | 2 | 316 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
PDB | 3f55_C | 0 | 41 | 355 | 2 | 316 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
PDB | 3f55_B | 0 | 41 | 355 | 2 | 316 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
PDB | 3f55_A | 0 | 41 | 355 | 2 | 316 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
PDB | 3em5_D | 0 | 41 | 355 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR962789 | 278 | 35 | 312 | 0 |
CB683628 | 259 | 97 | 355 | 0 |
CK207405 | 322 | 37 | 358 | 0 |
CB670174 | 235 | 37 | 271 | 0 |
FL818623 | 213 | 230 | 442 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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