Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00036852m |
Family | CBM45 |
Protein Properties | Length: 1466 Molecular Weight: 163248 Isoelectric Point: 5.7248 |
Chromosome | Chromosome/Scaffold: 000200 Start: 2166 End: 13204 |
Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM45 | 113 | 188 | 7.2e-23 |
LHWGALCRDRRDWLLPSRRPDGTAVYKNRALRTPFLKSGDNSTLRIEIDDPVVQAIEFLIFDETQNKWFKNNGQNF | |||
CBM45 | 456 | 533 | 7.2e-25 |
LHWSLAKKAGEWKAPPSNILPSGSKLLDMACETEFTKSELDGLHYQVVEIELDDGGYKGMPFVLRSGEMWIKNNGSDF |
Full Sequence |
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Protein Sequence Length: 1466 Download |
MSGFSAAASA AAAERCALAI RARPAASSSA TRQQASLRRS TGPRLPATLA ASRRGPVAPR 60 AVATPADRAS PDLVGKFTLD SNSQLQVAVN PASQGSVTEI DLEVTNTTGS LILHWGALCR 120 DRRDWLLPSR RPDGTAVYKN RALRTPFLKS GDNSTLRIEI DDPVVQAIEF LIFDETQNKW 180 FKNNGQNFQI QLQSSHHHGS GASGASSSAT SALVPEDLVQ IQAYLRWERK GKQSYTPEQE 240 KEEYEAARAE LIEELNRGVS LEKLRAKLTK APEAPESDES YSPASQITSD KIPEDLVQVQ 300 AYVRWEKAGK PNYPPEKQLV EFEEARKELQ AEVDKGTSID QLRKKILKGN IESKVSKQLK 360 NKNYFSVERI QRKKRDIMQI LSKHKHTVIE EQAEVAPKQL TVLDLLTNSL QKKDGCEVLS 420 KKLFKFGDKQ ILAISTKVLN KSKVYLATNH TEPLILHWSL AKKAGEWKAP PSNILPSGSK 480 LLDMACETEF TKSELDGLHY QVVEIELDDG GYKGMPFVLR SGEMWIKNNG SDFYLDLSTR 540 DTRNIKASDT GDAGKGTAKA LLERIAELEE DAQRSLMHRF NIAADLVDQA RDAGLLGIVG 600 LFVWIRFMAT RQLTWNKNYN VKPREISKAQ DRFTDDLENM YKAYPQYREI LRMIMAAVGR 660 GGEGDVGQRI RDEILVIQRN NDCKGGMMEE WHQKLHNNTS PDDVVICQAL IDYIKSDFDI 720 SVYWDTLNKN GITKERLLSY DRAIHSEPNF RSEQKEGLLR DLGNYMRSLK AVHSGADLES 780 AIATCMGYKS EGEGFMVGVQ INPVKGLPSG FPELLEFVLD HVEDKSAEPL LEGLLEARVE 840 LRPLLLDSPE RMKDLIFLDI ALDSTFRTAT ERSYEELHNA APEKIMYFIS LVLENLALSI 900 DDNEDILHCL KGWNQALEMA KQKEDDWALF AKAFLDRIRL ALASKGEQYH NMMQPSAEYL 960 GSLLSVDQWA VNIFTEEIIR GGSAATLSAL LNRFDPVLRN VAHLGSWQVI SPVEVSGFVA 1020 VVDELLAVQN KSYDKPTILV AKSVKGEEEI PDGVVGVITP DMPDVLSHVS VRARNSKVLF 1080 ATCFDHGTLS ELEGYHQKLF SFKPTSSDIT YREISESELQ QSSSPNAEAV HAVPSISLVN 1140 KKFLGKYAIS AEEFSEEMVG AKSRNIAYLK GKVPSWVGVP TSVAIPFGTF EKVLSDGLNK 1200 EVAQNIEKLK NRLAQDDFSA LGEIRKAVLN LAAPTELVKE LKEKMLGSGM PWPGDEGDQH 1260 WEQAWMAIKK VWASKWNERA FFSTRKVKLN HDYLSMAVLV QEIVNADYAF VIHTTNPSSG 1320 DSSEIYAEVV KGLGETLVGA YPGRAMSFIC KKDDMDSPKL LGYPSKPIGL FIRRSIIFRS 1380 DSNGEDLEGY AGAGLYDSVP MDEEDEVVLD YTTDPLIVNH GFRNSILSSI ARAGHAIEEL 1440 YGSPQDVEGV VKDGKIYVVQ TRPQM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK06241 | PRK06241 | 5.0e-9 | 1150 | 1338 | 218 | + phosphoenolpyruvate synthase; Validated | ||
COG0574 | PpsA | 5.0e-10 | 1261 | 1463 | 206 | + Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] | ||
PRK06464 | PRK06464 | 6.0e-14 | 1267 | 1463 | 212 | + phosphoenolpyruvate synthase; Validated | ||
TIGR01418 | PEP_synth | 3.0e-14 | 1267 | 1464 | 202 | + phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes [Energy metabolism, Glycolysis/gluconeogenesis]. | ||
pfam01326 | PPDK_N | 4.0e-33 | 1155 | 1464 | 336 | + Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). |
Gene Ontology | |
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GO Term | Description |
GO:0005524 | ATP binding |
GO:0016301 | kinase activity |
GO:0016310 | phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC80673.1 | 0 | 1 | 1465 | 1 | 1460 | hypothetical protein OsI_23085 [Oryza sativa Indica Group] |
GenBank | EEE65768.1 | 0 | 44 | 1465 | 78 | 1496 | hypothetical protein OsJ_21446 [Oryza sativa Japonica Group] |
RefSeq | NP_001057699.1 | 0 | 43 | 1465 | 1 | 1414 | Os06g0498400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002270485.1 | 0 | 57 | 1465 | 76 | 1470 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002438419.1 | 0 | 1 | 1465 | 1 | 1469 | hypothetical protein SORBIDRAFT_10g017820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2ols_A | 0.007 | 1267 | 1464 | 157 | 336 | A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777523 | 898 | 569 | 1466 | 0 |
HO794398 | 752 | 715 | 1466 | 0 |
HO794398 | 142 | 574 | 715 | 0 |
JG961045 | 285 | 1166 | 1450 | 0 |
JG942589 | 283 | 800 | 1082 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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