| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00037142m |
| Family | GH35 |
| Protein Properties | Length: 820 Molecular Weight: 91283.6 Isoelectric Point: 5.2375 |
| Chromosome | Chromosome/Scaffold: 000844 Start: 4350 End: 9315 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 39 | 349 | 0 |
| LVVGGTRRVLFAGEMHYTRSTPEMWPKLIAKAKEGGLDVIQTYVFWNVHEPVHGQYNFEGRYDLVRFIKEVQAQGLYVNLRIGPFIEAEWRYGGFPFWLH DVPDITFRSDNEPFKQHMQRFVTDIVNMMKHEQLYYPQGGPIIISQIENEYQMVEPAFGSSGQRYVSWSAAMAVNLQTGVPWTMCKQNDAPDPVVETFVG PNSANKPALWTENWTSRYLTYNTSTLQPYFFYLIYGNDTKLRSPEDIAFAVAYFLARKNGSYVSYYMYHGGTNFGRSASSYVTTNYYDGAPLDEYGLIWQ PTWGHLRELHT | |||
| Full Sequence |
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| Protein Sequence Length: 820 Download |
| MAVAAVLAVL AAVCVPAAAV VGEGGDGERR EVSADARALV VGGTRRVLFA GEMHYTRSTP 60 EMWPKLIAKA KEGGLDVIQT YVFWNVHEPV HGQYNFEGRY DLVRFIKEVQ AQGLYVNLRI 120 GPFIEAEWRY GGFPFWLHDV PDITFRSDNE PFKQHMQRFV TDIVNMMKHE QLYYPQGGPI 180 IISQIENEYQ MVEPAFGSSG QRYVSWSAAM AVNLQTGVPW TMCKQNDAPD PVVETFVGPN 240 SANKPALWTE NWTSRYLTYN TSTLQPYFFY LIYGNDTKLR SPEDIAFAVA YFLARKNGSY 300 VSYYMYHGGT NFGRSASSYV TTNYYDGAPL DEYGLIWQPT WGHLRELHTT VKQSSEPLLF 360 GTYSNFSLGQ EQEAHVFETE SRCVAFLVNF NPHQTSEVVF RNISLQLAPK SISILSDCKI 420 VVYETAKVNA QHGTRTTEQV QSLNDINTWK AFKESIPQDV TKAMHTGNQL FEHLTTTKDE 480 TDYLWYIVGY EYTPSDDNQL VLLNVESRAH ILHAFVNNEY VGKVHGSHDG PANIILSANI 540 SLKEGPNSIS LLSAMVGSPD SGAHMERRVF GIRKVSIQQG WEPEQILNNE LWGYEVGLFG 600 ERNRIYTQEG SDNVEWTAIN NLTYSSLTWY RTAFPTPAGN DAVVLNLTGM GKGEVWINGE 660 SIGRYWVSFK APSGNPSQSL YHIPRQFLNP QDNVLVLFEE MGGDPQQITV NTVSITGVCG 720 NVNELSAPSL QSQDKEPAVD ISCQEGKQIS AIEFASYGNP IGDCASYGIG SCHAESSEWA 780 VKQDCVGKTR CSVPVTPAKF GGDPCPGIQK SLLLVASCR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-5 | 60 | 143 | 91 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 7.0e-17 | 741 | 818 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 5.0e-17 | 32 | 337 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-124 | 38 | 351 | 337 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 32 | 818 | 830 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC64531.1 | 0 | 30 | 819 | 27 | 811 | beta-galactosidase 6 [Oryza sativa Indica Group] |
| GenBank | EEC79266.1 | 0 | 30 | 819 | 23 | 761 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
| GenBank | EEE63798.1 | 0 | 30 | 819 | 27 | 765 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q75HQ3 | 0 | 30 | 819 | 27 | 775 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
| RefSeq | XP_002441139.1 | 0 | 23 | 819 | 33 | 784 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5e-32 | 38 | 347 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.004 | 542 | 702 | 435 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 2e-26 | 29 | 313 | 3 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 2e-26 | 29 | 313 | 3 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
