| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00037143m |
| Family | GH35 |
| Protein Properties | Length: 718 Molecular Weight: 81166.9 Isoelectric Point: 9.0704 |
| Chromosome | Chromosome/Scaffold: 000844 Start: 25119 End: 30436 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 39 | 350 | 0 |
| LILDGRRRMLFSGEMHYTRSTPEMWPTLIAKAKEGGLDVVQTYVFWNVHEPVKGQYNFLGRYDLVKFIKEIQAQGLYVSLRIGPFIEAEWKYGGFPFWLH DQHMQRFVTRIVNMMKHEGLYYPQGGPIIISQIENEYQMLQPAFGSSGPRYIHWAASMAVNLQTGVPWMMCKQDNAPDPVINSCNGLTCGETFVGPNSPN KPALWTENWTSRFVKMTLFPLSIRSILMVQKGFLTYGSDTQLRSPEDIAFTVALFLARKKGSFVNYYMYHGGTNFGRFASSYVTTSYYDGAPLDEYGLIW QPTWGHLRELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 718 Download |
| MALVAAAALI VLAALRTSPA AAGIQRGVRR EVSYDGRALI LDGRRRMLFS GEMHYTRSTP 60 EMWPTLIAKA KEGGLDVVQT YVFWNVHEPV KGQYNFLGRY DLVKFIKEIQ AQGLYVSLRI 120 GPFIEAEWKY GGFPFWLHDQ HMQRFVTRIV NMMKHEGLYY PQGGPIIISQ IENEYQMLQP 180 AFGSSGPRYI HWAASMAVNL QTGVPWMMCK QDNAPDPVIN SCNGLTCGET FVGPNSPNKP 240 ALWTENWTSR FVKMTLFPLS IRSILMVQKG FLTYGSDTQL RSPEDIAFTV ALFLARKKGS 300 FVNYYMYHGG TNFGRFASSY VTTSYYDGAP LDEYGLIWQP TWGHLRELHA AVKQSSEPLL 360 FGKYSSFLLG QEQEAHVFES ELKCVAFLVN FDKSQMPKVT FRHLSFQLAP KSISIISDCR 420 SVVYETAKVK TQHGSRTDEV VQSLSDINTW RAFKEPIPLE VKKAMYTTSQ LLDQLSATKD 480 ETDYLWYIVS HDYRAIGDDQ LVLLNVESRA HMVHAFVNNQ YVGQYPLRIV GSVHGSHDEG 540 GNIILKARIS LMEGQNTISL LNVMVGSPDS GAHMERRVFG IRKVAVQNGK QPQQVLNNRL 600 WGYQVGLLGE RNRIYTRVGL NSIEWETIND TTYHPLTWYK TKFATPAGND AVALNLAGMG 660 KGEVWINVES IERYWVSFKA PSGNPSQSLF HIPRHFLKPQ GNTLVLFEEM GGNPKQIT 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-5 | 60 | 175 | 149 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 1.0e-17 | 32 | 175 | 169 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-124 | 38 | 352 | 343 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 32 | 718 | 729 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC64531.1 | 0 | 30 | 718 | 27 | 701 | beta-galactosidase 6 [Oryza sativa Indica Group] |
| GenBank | EEC79266.1 | 0 | 30 | 718 | 23 | 651 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
| GenBank | EEE63798.1 | 0 | 30 | 718 | 27 | 655 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q75HQ3 | 0 | 30 | 718 | 27 | 665 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
| RefSeq | XP_002441139.1 | 0 | 25 | 718 | 35 | 674 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-30 | 38 | 348 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 2e-27 | 41 | 335 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 2e-27 | 41 | 335 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
