| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00037359m |
| Family | GT31 |
| Protein Properties | Length: 635 Molecular Weight: 70580.5 Isoelectric Point: 8.0323 |
| Chromosome | Chromosome/Scaffold: 000160 Start: 18191 End: 21093 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT31 | 402 | 585 | 0 |
| ERMAVRKSWMISSRRSSNVVARFFVALNGKKEVNEELKKEAEYFGDIVIVPFMDNYDLVVLKTIAIAEYGVRVVPAKHIMKCDDDTFVRIESVIDQVKKV QNGKSMYVGNINYYHRPLRSGKWSVTYEEWPEQVYPPYANGPGYVISSDIAQYILSEFDNKALRLFKMEDVSMGMWVEKFNTTR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 635 Download |
| MPPKRACRLA LLAAAAAYLL FLLLFELPSF DVSTAPPRHA HAAATHRARR RELEAAGSAL 60 RSPSPLRPHK SASLAVSSVR FHRPNSSSSI DATASAAFAA ARPHLAHLLS YSDYASPSPS 120 PSAAASASSC PVTVSAPGDR LACGGAGVLA VELPCGMAVG SRVTVVARPR AARAEGEPRI 180 AARREGGAPV MVSHFMVELL GTKAVQGEEP PRVLHFNPRI RGDFSGRPVI ELNTCYRMQW 240 AQPQRCEGFA SRPDEDTVDG ELKCEKWIRD DYSSSEESKM KSWLSRLIGR PSIDWPYPFA 300 EGKQFVLTII AGLEGYHINV DGRHITSFPY RTGYNLEDAT ELSLKGDLDV ESVFVAHLPS 360 SPPSFSPQSY LEMSEQWKAE PLPTEPVELF IGILSAANHF SERMAVRKSW MISSRRSSNV 420 VARFFVALNG KKEVNEELKK EAEYFGDIVI VPFMDNYDLV VLKTIAIAEY GVRVVPAKHI 480 MKCDDDTFVR IESVIDQVKK VQNGKSMYVG NINYYHRPLR SGKWSVTYEE WPEQVYPPYA 540 NGPGYVISSD IAQYILSEFD NKALRLFKME DVSMGMWVEK FNTTRQPVEY LHDVRFYQPG 600 CFDGYFTAHY QSPQHMICLW RKLQAGSAQC CNVR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 2.0e-14 | 194 | 353 | 160 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-15 | 193 | 354 | 162 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 5.0e-19 | 193 | 353 | 161 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 2.0e-27 | 403 | 580 | 188 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 4.0e-114 | 191 | 634 | 458 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO72371.1 | 0 | 2 | 634 | 3 | 651 | putative galactosyltransferase [Oryza sativa Japonica Group] |
| GenBank | ABF99414.1 | 0 | 2 | 634 | 3 | 651 | galactosyltransferase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEE60126.1 | 0 | 2 | 634 | 3 | 652 | hypothetical protein OsJ_13004 [Oryza sativa Japonica Group] |
| RefSeq | NP_001051611.1 | 0 | 2 | 634 | 3 | 677 | Os03g0803600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463710.1 | 0 | 1 | 634 | 1 | 638 | hypothetical protein SORBIDRAFT_01g004660 [Sorghum bicolor] |
