Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00037360m |
Family | GT31 |
Protein Properties | Length: 657 Molecular Weight: 73862.1 Isoelectric Point: 6.7362 |
Chromosome | Chromosome/Scaffold: 000160 Start: 32 End: 3839 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 425 | 606 | 0 |
ERMAVRKTWMSASQKSSNVVARFFVALHGRNEINVELKKEAEFFGDIVIMPFMDSYDLVVLKTIAICEYGVHVVSARYIMKCDDDTFVRLESVMAEVKKI RNGESLYIGNMNYHHKPLRDGKWAVTYEEWPEEDYPIYANGPGYVISSDIADAILSEFLNHKLRLFKMEDVSMGMWVERFNS |
Full Sequence |
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Protein Sequence Length: 657 Download |
MRRPPGAGAP CRRRAIQGFV ALFLAYALFV LLLESPLVST SLPGAGASAA AASRKLHLDG 60 AWEGGRAAPA RPSKHPHRET LSADGGRGRA RRLSWFVSGL ELRHLNSTRS GSLRKVAAEA 120 AESGARVFAD LHTLATNLTF SQDSPDEEER SMCPHSIALS GDEFRERGRT VELPCGLTLG 180 SYITVAATPH EAHPERDPKI TLLKEGEEPI MVSQFMMELQ GLKTVDGEDP PRILHFNPRL 240 RGDWSGKPVI EQNTCYRMQW GTPLRCEGWR SRADEETVDG LVKCEKWIRD DEGRSEESKT 300 SWWLNRLIGR TKTVSIDWPY PFVEDHLFVL TLTAGLEGYH VNVDGRHVTS FPYRTGFVLE 360 DATGLSLNGD LDVQSVFAGS LPTTHPSFSP QKHLEMLPSW QAPPLPDEPV EIFIGILSAG 420 NHFAERMAVR KTWMSASQKS SNVVARFFVA LHGRNEINVE LKKEAEFFGD IVIMPFMDSY 480 DLVVLKTIAI CEYGVHVVSA RYIMKCDDDT FVRLESVMAE VKKIRNGESL YIGNMNYHHK 540 PLRDGKWAVT YEEWPEEDYP IYANGPGYVI SSDIADAILS EFLNHKLRLF KMEDVSMGMW 600 VERFNSTRPV KYVHSIKFCQ FGCIDDYYTA HYQSPRQMLC LWDKLQAGKA QCCNMR* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 1.0e-13 | 174 | 376 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 7.0e-17 | 170 | 377 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 2.0e-20 | 169 | 376 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 2.0e-26 | 424 | 603 | 192 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 3.0e-131 | 153 | 656 | 522 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS07235.1 | 0 | 1 | 588 | 1 | 587 | putative galactosyltransferase, 3'-partial [Oryza sativa Japonica Group] |
GenBank | EAY92235.1 | 0 | 1 | 656 | 1 | 655 | hypothetical protein OsI_13955 [Oryza sativa Indica Group] |
RefSeq | NP_001051614.1 | 0 | 1 | 656 | 1 | 655 | Os03g0803900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001059116.1 | 0 | 57 | 656 | 64 | 663 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002463707.1 | 0 | 1 | 656 | 1 | 656 | hypothetical protein SORBIDRAFT_01g004630 [Sorghum bicolor] |