y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00038026m |
Family | GH35 |
Protein Properties | Length: 839 Molecular Weight: 93915.9 Isoelectric Point: 7.124 |
Chromosome | Chromosome/Scaffold: 000505 Start: 1257 End: 7160 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 44 | 347 | 0 |
LMIDGKRDLFFSGAVHYPRSPPELWPKLIQRAKEGGLNTIETYVFWNAHEPEKGKYNFEGRLDLIKYLKVIQDHDMYAVVRIGPFIQAEWNHGGLPYWLR EIDRIIFRANNDAYKKEMERFVRFIVQKLKDAELFASQGGPIILTQIENEYGNIKKDHKIDGDKYLEWAAQMALSTQTGVPWVMCKQSSAPGEVIPTCNG RHCGDTWTLRDKDKPMLWTENWTAQFRAYGDQVAMRSAEDIAYAVLRFFAKGGSMVNYYMYHGGTNFGRTGASYVLTGYYDEAPMDEYGMCKEPKFGHLR DLHN |
Full Sequence |
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Protein Sequence Length: 839 Download |
MTAVRAAAVL VAAAALAILL PGWAAAAWTL TKKGTIVTYD ARSLMIDGKR DLFFSGAVHY 60 PRSPPELWPK LIQRAKEGGL NTIETYVFWN AHEPEKGKYN FEGRLDLIKY LKVIQDHDMY 120 AVVRIGPFIQ AEWNHGGLPY WLREIDRIIF RANNDAYKKE MERFVRFIVQ KLKDAELFAS 180 QGGPIILTQI ENEYGNIKKD HKIDGDKYLE WAAQMALSTQ TGVPWVMCKQ SSAPGEVIPT 240 CNGRHCGDTW TLRDKDKPML WTENWTAQFR AYGDQVAMRS AEDIAYAVLR FFAKGGSMVN 300 YYMYHGGTNF GRTGASYVLT GYYDEAPMDE YGMCKEPKFG HLRDLHNVIR SYQKAFLTGE 360 HSSEMLGHGY EAHTFELPED KLCLSFLSNN NTGEDGTVIF RGEKHYVPSR SVSILVGCKN 420 VVYNTKRVFV QHSERSFHTS EVTSKNNLWE MFSEAIPKYH TTKIRAKEPL EQYNQTKDAT 480 DYLWYTTSFR LESDDLPFRG DIRPVLQVRS SAHSMIGFAN DAFVGSGRGS KQVKGFMFER 540 PVDLKVGVNH ITLLSTAMGM KDSGGELAEV KGGIQECLIQ GLNTGTLDLQ VNGWGHKAAL 600 DGEDKEIYSE KGVGKVQWKP AQNDMPTTWY KRYFDEPDGD DIVVLDMSSM SKGMIFVNGE 660 GMGRYWVSYK TLAGTPSQAL YHIPRPFLKP KDNLLVVFEE ELGKPGGILI QTVTRDDICV 720 LLSEHNPAQI KTWDTDGDKI KLIAEDHNTR GTLTCPPKKT IQEVVFASFG NPEGMCGNFT 780 VGTCHTPNAK QVVEKECLGK PSCVLPVSHT VYGADINCQS TTATLGVQVR CGSEKKGA* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-7 | 64 | 195 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-18 | 753 | 831 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-21 | 37 | 214 | 189 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-134 | 43 | 349 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 37 | 831 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAG30724.1 | 0 | 26 | 831 | 24 | 825 | putative beta-galactosidase precursor [Hordeum vulgare] |
GenBank | EEC84965.1 | 0 | 28 | 831 | 27 | 799 | hypothetical protein OsI_32205 [Oryza sativa Indica Group] |
GenBank | EEE70132.1 | 0 | 28 | 831 | 27 | 830 | hypothetical protein OsJ_30164 [Oryza sativa Japonica Group] |
Swiss-Prot | Q0IZZ8 | 0 | 28 | 833 | 27 | 832 | BGL12_ORYSJ RecName: Full=Beta-galactosidase 12; Short=Lactase 12; Flags: Precursor |
RefSeq | XP_002460584.1 | 0 | 29 | 838 | 28 | 803 | hypothetical protein SORBIDRAFT_02g031260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 7.00649e-43 | 43 | 345 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 1e-36 | 46 | 311 | 12 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.0003 | 545 | 701 | 437 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 1e-36 | 46 | 311 | 12 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |