| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00038061m |
| Family | GH35 |
| Protein Properties | Length: 845 Molecular Weight: 93554.5 Isoelectric Point: 7.8253 |
| Chromosome | Chromosome/Scaffold: 000803 Start: 18125 End: 24798 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 36 | 340 | 0 |
| LIIDGRRRLVISTSIHYPRSVPEMWPKLVAEAKDGGADCIETYVFWNGHEIAPGQYYFEDRFDLVRFVKVVRDAGLLLILRIGPFVAAEWNFGGVPVWLH YVPGTVFRTNNEPFKSHMQSFTTYIVNMMKKEQLFASQGGNIILAQIENEYGGYLEEYYGTAGKAYAMWAASMALAQNTGVPWIMCQQPDAPDPVINTCN SFYCDGFQPNSPTKPKFWTENWPGWFQTFGESNPHRPPEDVAFAVARFFEKGGSVQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLRRFPKWAHL KELHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 845 Download |
| MAAAAASFAA LPCLLLVLLL PSLGAAANVT YDHRSLIIDG RRRLVISTSI HYPRSVPEMW 60 PKLVAEAKDG GADCIETYVF WNGHEIAPGQ YYFEDRFDLV RFVKVVRDAG LLLILRIGPF 120 VAAEWNFGGV PVWLHYVPGT VFRTNNEPFK SHMQSFTTYI VNMMKKEQLF ASQGGNIILA 180 QIENEYGGYL EEYYGTAGKA YAMWAASMAL AQNTGVPWIM CQQPDAPDPV INTCNSFYCD 240 GFQPNSPTKP KFWTENWPGW FQTFGESNPH RPPEDVAFAV ARFFEKGGSV QNYYVYHGGT 300 NFGRTTGGPF ITTSYDYDAP IDEYGLRRFP KWAHLKELHK FIKLCEHTLL YGNTSFLSLG 360 PKQEADIYTD RSGGCVAFLA NIDSDKDKVV TFRNRQYDLP AWSVSILPDC KNVVFNTAKV 420 QSQTSMVVMV PESLRASKPE PWSIFRETTG IWGKNDFIRN GFVDHINTTK DTTDYLWYTT 480 SFSVNGSYSS KGSRAVLNID SKGHGVHAFL NNELIGSAYG NGSKSSFTVG LPINLRTGKN 540 DLALLSMTIG LQNAGPSYEW IGAGFTNVNI SGLKNGAVDL SSNNWAHKIG LEGEYYSLFK 600 PDQRSNKRWI PQSEPPKKQP LTWYKVNVDV PQGDDPVGID MQSMGKGLAW LNGNAIGRYW 660 PRTSSTDDRC TPSCNYRGTF DPNKCRTGCG QPTQRWYHVP RSWFHPSGNT LVVFEEKGGD 720 PTKITFSRRV VSSVCSFVSE HYPSIDVESW DKSTTNDATT AAKVQLSCPK GKNISSVKFA 780 SFGNPSGTCR SYQKGSCHHP NSLSVVEKAC LNTNSCTVSL SDGGFGNDLC PGVTKTLAVE 840 ADCS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.002 | 463 | 544 | 83 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 9.0e-11 | 29 | 135 | 109 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 1.0e-21 | 766 | 843 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-136 | 35 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 844 | 822 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAG95687.1 | 0 | 25 | 844 | 102 | 919 | unnamed protein product [Oryza sativa Japonica Group] |
| GenBank | EEC71891.1 | 0 | 27 | 844 | 36 | 851 | hypothetical protein OsI_04635 [Oryza sativa Indica Group] |
| RefSeq | NP_001044964.1 | 0 | 25 | 844 | 34 | 851 | Os01g0875500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151478.1 | 0 | 22 | 844 | 22 | 844 | beta-galactosidase [Zea mays] |
| RefSeq | XP_002456725.1 | 0 | 22 | 844 | 22 | 843 | hypothetical protein SORBIDRAFT_03g041450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-38 | 35 | 593 | 14 | 606 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 5e-35 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 5e-35 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
