| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00038064m |
| Family | GH35 |
| Protein Properties | Length: 778 Molecular Weight: 87500 Isoelectric Point: 9.1391 |
| Chromosome | Chromosome/Scaffold: 000803 Start: 8901 End: 16027 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 46 | 335 | 0 |
| LILDGARRMLFSGDMHYPRSTPEMWPDLIAKAKKGGLDVIQTYVFWNAHEPVQGQYNFKGRYDLVKFIREIHAQGLYVSLRLGPFVESEWKYGGLPFWLR GIPNITFRCDNEAFKRHMQNFVTKIVNLMKDERLFYPQGGPIIMSQIENEYKLVEAAFHSKGPPYVRWAAAMAVNLQTGVPWMMCKQDDAPDPIINTCNG LICGETFLGPNSPNKPALWTENWTSRYPVYGQDRRYRSAADLAFAVALFIVRKKGSFVNYYMYHGGTNFGRFASSYVTTSYYDGAPLDEY | |||
| Full Sequence |
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| Protein Sequence Length: 778 Download |
| MTAVVVLAAL AALAAAGTGR ARGAEEERGN RTAGRRREVT YDGRALILDG ARRMLFSGDM 60 HYPRSTPEMW PDLIAKAKKG GLDVIQTYVF WNAHEPVQGQ YNFKGRYDLV KFIREIHAQG 120 LYVSLRLGPF VESEWKYGGL PFWLRGIPNI TFRCDNEAFK RHMQNFVTKI VNLMKDERLF 180 YPQGGPIIMS QIENEYKLVE AAFHSKGPPY VRWAAAMAVN LQTGVPWMMC KQDDAPDPII 240 NTCNGLICGE TFLGPNSPNK PALWTENWTS RYPVYGQDRR YRSAADLAFA VALFIVRKKG 300 SFVNYYMYHG GTNFGRFASS YVTTSYYDGA PLDEYESECV AFLVNFDKHK ISTIQFGEEV 360 LQLAPKSISI LSQCRELIFQ TGKINAQYGL RTAQVVQSIN HVDRWKCFKE PIPTVPSKMS 420 HVGNQLYEHL STTKDETDYL WYLAIHNYKR NGNRQLVLNV EAHAHILHAF INSDYVGSVH 480 GSHDKPGNIV LKAPISLREG RNSISLLCVM VGSPDLGAYM ERRTFGVRRV SIKRRQQKLH 540 STNIVHWKNQ VGLSGETNKI YTSEGSSRAE WSAIDKSMHL PLIWYKTTFD TPWGNDPVTL 600 NMSSMGKGEV WINGESIGRY WVSFKTPSGK PSQSLYHIPR YFLKTGENLL VIMEEIGGDP 660 LQITVNTMSV TRIYSSVSEL STPSLLSREK HPAIHLRCQR GKHITDIEFA SYGNSHENCI 720 ESGQNCHGSC HAEMSEFVVK NACLGRRKCV VPVRAPKFGG DPCPGIEKSL SVVAICG* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-6 | 61 | 205 | 160 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 2.0e-15 | 696 | 776 | 87 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 2.0e-21 | 39 | 321 | 331 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-133 | 45 | 335 | 305 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 39 | 776 | 825 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC64531.1 | 0 | 30 | 776 | 20 | 810 | beta-galactosidase 6 [Oryza sativa Indica Group] |
| GenBank | EEC79266.1 | 0 | 30 | 776 | 16 | 760 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
| GenBank | EEE63798.1 | 0 | 30 | 776 | 20 | 764 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q75HQ3 | 0 | 30 | 776 | 20 | 774 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
| RefSeq | XP_002441139.1 | 0 | 22 | 776 | 30 | 783 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.00053e-42 | 45 | 657 | 14 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 6e-34 | 48 | 657 | 12 | 573 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 6e-34 | 48 | 657 | 12 | 573 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 6e-34 | 48 | 657 | 12 | 573 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8c_A | 6e-34 | 48 | 657 | 12 | 573 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
