Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00038234m |
Family | GH17 |
Protein Properties | Length: 392 Molecular Weight: 43431.1 Isoelectric Point: 7.6208 |
Chromosome | Chromosome/Scaffold: 000177 Start: 7520 End: 10831 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 33 | 349 | 0 |
GINYGRIANNIPSPDKVVELLKKSKIRNVKIYDSDHNVLDAFKGSGLNLVIAIPNGLVKDMAANESRSMDWLNQNVKPYLPQTRIVGITVGNEVLGGQDQ SLYQPLVDAVKNVYNGLKRLHLEKEIELFTPHSEAVFANSYPPSACVFKEELMPYMKPLLDLFAMIHSPFYVNSYPFLAYISDPEHIDINYALFKPNNGI VDPNTSLHYDNMFDAQIDAAYAALHAAGYDDMEVRVAETGWASSGDQNEAGTSSENARTYNFNLRKRLFLRKGTPLKPKRPVKAYIFALFNENQKPGPSS ERHYGLFLPDGRISYDI |
Full Sequence |
---|
Protein Sequence Length: 392 Download |
MVPRMLLLLC CFCLLAFPPP GPLAVEAFVG GYGINYGRIA NNIPSPDKVV ELLKKSKIRN 60 VKIYDSDHNV LDAFKGSGLN LVIAIPNGLV KDMAANESRS MDWLNQNVKP YLPQTRIVGI 120 TVGNEVLGGQ DQSLYQPLVD AVKNVYNGLK RLHLEKEIEL FTPHSEAVFA NSYPPSACVF 180 KEELMPYMKP LLDLFAMIHS PFYVNSYPFL AYISDPEHID INYALFKPNN GIVDPNTSLH 240 YDNMFDAQID AAYAALHAAG YDDMEVRVAE TGWASSGDQN EAGTSSENAR TYNFNLRKRL 300 FLRKGTPLKP KRPVKAYIFA LFNENQKPGP SSERHYGLFL PDGRISYDIG VSGLLPSSAS 360 SSMLSVKKIR AGGWILHYLA MVLLSIFIFG P* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 266 | 339 | 77 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-85 | 33 | 349 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG42425.1 | 0 | 1 | 389 | 1 | 388 | hypothetical protein [Zea mays] |
DDBJ | BAF49603.1 | 0 | 16 | 389 | 66 | 438 | beta-1,3-glucanase [Agrostis alba] |
RefSeq | NP_001058028.1 | 0 | 16 | 372 | 55 | 411 | Os06g0607000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130934.1 | 0 | 1 | 389 | 1 | 388 | hypothetical protein LOC100192039 [Zea mays] |
RefSeq | XP_002437258.1 | 0 | 21 | 370 | 21 | 370 | hypothetical protein SORBIDRAFT_10g023710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 349 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 33 | 349 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 33 | 349 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 33 | 352 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 33 | 352 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |