| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00038281m |
| Family | AA1 |
| Protein Properties | Length: 673 Molecular Weight: 73781.8 Isoelectric Point: 6.9339 |
| Chromosome | Chromosome/Scaffold: 000001 Start: 96 End: 3579 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 3 | 500 | 0 |
| ITAVNGQLPGPTIEAREGDTVVVHLVNESPYDMTIHWHGIFQRGTPWADGPAMVTQCPVKPGGNYTYRFNVTDQEGSLWWHAHISLLRATVYGALVIRPR GGAEAYPFPKPHGEETVLLGEWWNANVEDLDRMAFLTGNTPPNADAYTINGKPGDFYNCSNANPRATRCRWCAETYRFQVQRNETYLLRIINAALNTPMF FKVANHSFTVVGADAVYTTPYETDVVVVAPGQTVDALMVTGAPVGRYYMAASPYDSAIPQGPPFSMTTGTAIVEYVGSAGEETPQLPSRPEYNDTNTAFR FFSNLTALVLPGKPTVPLSVDTRMFVTVGLGNSDCQPAQLLCNTTGTRPPIFSSSMNNASFVLPDSVSMLQAHYANASAGVYTSDFPDQPPVIFDYTADA SDTARLKYTTKSTKVKTLRYNETVEMVLQNTRLIAKESHPMHLHGFNFFVLAQGFGNYDQATATPQFNLVNPQERNTVAVPTGGWAVIRFVANNPGII | |||
| Full Sequence |
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| Protein Sequence Length: 673 Download |
| MIITAVNGQL PGPTIEAREG DTVVVHLVNE SPYDMTIHWH GIFQRGTPWA DGPAMVTQCP 60 VKPGGNYTYR FNVTDQEGSL WWHAHISLLR ATVYGALVIR PRGGAEAYPF PKPHGEETVL 120 LGEWWNANVE DLDRMAFLTG NTPPNADAYT INGKPGDFYN CSNANPRATR CRWCAETYRF 180 QVQRNETYLL RIINAALNTP MFFKVANHSF TVVGADAVYT TPYETDVVVV APGQTVDALM 240 VTGAPVGRYY MAASPYDSAI PQGPPFSMTT GTAIVEYVGS AGEETPQLPS RPEYNDTNTA 300 FRFFSNLTAL VLPGKPTVPL SVDTRMFVTV GLGNSDCQPA QLLCNTTGTR PPIFSSSMNN 360 ASFVLPDSVS MLQAHYANAS AGVYTSDFPD QPPVIFDYTA DASDTARLKY TTKSTKVKTL 420 RYNETVEMVL QNTRLIAKES HPMHLHGFNF FVLAQGFGNY DQATATPQFN LVNPQERNTV 480 AVPTGGWAVI RFVANNPGII SLSTCTSPTT GPKRPRQTAA VLRSIRHSTD QEEEGTSGDL 540 PTVGMCEGDP YRATRVFLAK ETTRAEDVAT TPTPHAAVCA AHSRRACPST RTENGREGIN 600 SSASHAIAHC CLTTENCDRT RPPDKLSPSA GVPQVSQSLL RERRAEDVRT YRRQDDRRAP 660 IEQRDRPDRP KM* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 8.0e-50 | 3 | 102 | 102 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 7.0e-64 | 2 | 499 | 522 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-64 | 1 | 499 | 516 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-79 | 2 | 499 | 523 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 3 | 499 | 498 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 1 | 499 | 125 | 616 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78752.1 | 0 | 1 | 499 | 44 | 535 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE53032.1 | 0 | 1 | 499 | 50 | 516 | hypothetical protein OsJ_35752 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 1 | 499 | 44 | 535 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442097.1 | 0 | 2 | 499 | 48 | 535 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 2 | 508 | 23 | 511 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asq_A | 0 | 2 | 508 | 23 | 511 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asp_B | 0 | 2 | 508 | 23 | 511 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asp_A | 0 | 2 | 508 | 23 | 511 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1aso_B | 0 | 2 | 508 | 23 | 511 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FL869217 | 246 | 229 | 474 | 0 |
| EE187233 | 240 | 2 | 241 | 0 |
| EE011390 | 240 | 2 | 241 | 0 |
| EC888881 | 240 | 2 | 241 | 0 |
| EE171524 | 240 | 2 | 241 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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