y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00038432m |
Family | GH9 |
Protein Properties | Length: 631 Molecular Weight: 68511.1 Isoelectric Point: 8.7693 |
Chromosome | Chromosome/Scaffold: 000460 Start: 19024 End: 21536 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 113 | 590 | 0 |
QYAEALRKALLFFNAQKSGRLPRSNGIPWRGDSGLKDGSDAADVKGGLVGGYYDAGDNIKFHFPMAFSMTLLSWSLVEYSAKYKAVGEYDHVRELIRWGT DYLLRTFNSSASTIGHVYAQVGAAKINGRTPDDHYCWNRPEDMAYPRPSLAVSSAPDLGGEIAAALAAASIAFRDDDAYSRKLVHGAATMYDFATRGSAS DQQQPTYSGHRPEIEPFYNSTSYWDEHVWGAAWMYYATGNSSYIATATAPGLAARARAFDDILDLSVFSWDNKLPGAGLLLSRLRMFLNPGYPYEQSLAG YHTAAGLGMCKCFRRFAAFNFTGGGLALFNHGRGQPLQYAVANAFLAALYADYLEAVNVPGWYCGPNFMAAGDLRAFARSQLDYILGDNPRKMSYVVGYG GRYPRHVHHRGASTPRNRGKYSCTGGRRWRDTKKADPNVLTGAMVGGPDRHDRFNDSRMAFGQTEPTLVGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 631 Download |
MYSANHWGGS FEIATDGASE DDDSGNMDLD PGAVSAARQH RHELDETQQG WLLGPPAAEK 60 KNRHVDLGCV VVKRKVLWWA FWGLAAGFVI VGLPVIVSKS IPRRAPRPPP PDQYAEALRK 120 ALLFFNAQKS GRLPRSNGIP WRGDSGLKDG SDAADVKGGL VGGYYDAGDN IKFHFPMAFS 180 MTLLSWSLVE YSAKYKAVGE YDHVRELIRW GTDYLLRTFN SSASTIGHVY AQVGAAKING 240 RTPDDHYCWN RPEDMAYPRP SLAVSSAPDL GGEIAAALAA ASIAFRDDDA YSRKLVHGAA 300 TMYDFATRGS ASDQQQPTYS GHRPEIEPFY NSTSYWDEHV WGAAWMYYAT GNSSYIATAT 360 APGLAARARA FDDILDLSVF SWDNKLPGAG LLLSRLRMFL NPGYPYEQSL AGYHTAAGLG 420 MCKCFRRFAA FNFTGGGLAL FNHGRGQPLQ YAVANAFLAA LYADYLEAVN VPGWYCGPNF 480 MAAGDLRAFA RSQLDYILGD NPRKMSYVVG YGGRYPRHVH HRGASTPRNR GKYSCTGGRR 540 WRDTKKADPN VLTGAMVGGP DRHDRFNDSR MAFGQTEPTL VGNAGLVAAL VAVTSSGGAV 600 GVGAVDKNSM FSAVPPMFPA TPPPPPAWKP * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 6.0e-95 | 112 | 578 | 478 | + endoglucanase | ||
PLN00119 | PLN00119 | 1.0e-96 | 114 | 578 | 475 | + endoglucanase | ||
PLN02266 | PLN02266 | 2.0e-103 | 114 | 578 | 476 | + endoglucanase | ||
PLN02345 | PLN02345 | 9.0e-115 | 117 | 578 | 470 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-125 | 114 | 578 | 472 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG29946.1 | 0 | 1 | 630 | 1 | 623 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
GenBank | EAY94707.1 | 0 | 1 | 630 | 1 | 641 | hypothetical protein OsI_16485 [Oryza sativa Indica Group] |
RefSeq | NP_001053204.1 | 0 | 1 | 630 | 1 | 623 | Os04g0497200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147970.1 | 0 | 1 | 630 | 1 | 623 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
RefSeq | XP_002446733.1 | 0 | 1 | 614 | 1 | 614 | hypothetical protein SORBIDRAFT_06g021440 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 114 | 597 | 5 | 432 | A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium Clostridium Cellulovorans |
PDB | 1ksc_A | 0 | 114 | 597 | 5 | 432 | A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium Clostridium Cellulovorans |
PDB | 1ks8_A | 0 | 114 | 597 | 5 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 110 | 600 | 2 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 110 | 600 | 2 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |