y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00038528m |
Family | AA1 |
Protein Properties | Length: 589 Molecular Weight: 65169.6 Isoelectric Point: 5.59 |
Chromosome | Chromosome/Scaffold: 000715 Start: 18691 End: 21408 |
Description | SKU5 similar 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 45 | 512 | 0 |
KVIGINGQFPGPPLNVTTNWNVVVNVRNALDEPLLLTWNGVQQRKTAWQDGVLGTNCAIPAGWNWTYTFQVKDQVGSFFYFPSTPLHRAAGGYGGITINN RDVIPIPFGFPDGDITLFIGDWYNRGHKELRGALDGGTLLGAPDGVLINGLGPYQYNTSLVPPGIVYERINVEPGKNYRFRVHNVGVSTSLNFRIQNHNL LLVETEGSYTSQQNYTNLDIHVGQSYSFLVTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSLGPASGPLPDPPNDQYDTAFSINQARSIRWNV TASGARPNPQGSFHYGDITVTDVYLLQSRPPELIDGKLRSTLNEISYIAPSTPLVLAQLFNVPGVYKLDFPNHPMNRLPKVDTSIINGTYKGFMEIIFQN NATTVQSYHLDGYAFFVVGMDYGIWTENSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRV |
Full Sequence |
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Protein Sequence Length: 589 Download |
MPPPLLLLLL LLAASPAPAR AGDPYAYYDW EVSYVSAQPL GVKQKVIGIN GQFPGPPLNV 60 TTNWNVVVNV RNALDEPLLL TWNGVQQRKT AWQDGVLGTN CAIPAGWNWT YTFQVKDQVG 120 SFFYFPSTPL HRAAGGYGGI TINNRDVIPI PFGFPDGDIT LFIGDWYNRG HKELRGALDG 180 GTLLGAPDGV LINGLGPYQY NTSLVPPGIV YERINVEPGK NYRFRVHNVG VSTSLNFRIQ 240 NHNLLLVETE GSYTSQQNYT NLDIHVGQSY SFLVTMDQNA STDYYVVASA RFVDAAVVDK 300 LTGVAILHYS NSLGPASGPL PDPPNDQYDT AFSINQARSI RWNVTASGAR PNPQGSFHYG 360 DITVTDVYLL QSRPPELIDG KLRSTLNEIS YIAPSTPLVL AQLFNVPGVY KLDFPNHPMN 420 RLPKVDTSII NGTYKGFMEI IFQNNATTVQ SYHLDGYAFF VVGMDYGIWT ENSRGTYNKW 480 DGVARSTIQV FPGAWTAILV FLDNAGIWNL RVQNLDTWYL GQEVYINVVN PEDNSSTLPD 540 NAIFCGALSS LQKEQSHRFV YSEASPIAQW RNTVSLLFLL ASFTIWLQ* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 2.0e-172 | 22 | 550 | 536 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 22 | 586 | 573 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 22 | 557 | 545 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 23 | 546 | 528 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 24 | 549 | 539 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN40384.1 | 0 | 19 | 557 | 20 | 560 | unknown [Picea sitchensis] |
EMBL | CBI35585.1 | 0 | 19 | 587 | 23 | 593 | unnamed protein product [Vitis vinifera] |
GenBank | EEE53691.1 | 0 | 5 | 586 | 15 | 569 | hypothetical protein OsJ_00004 [Oryza sativa Japonica Group] |
RefSeq | NP_001041735.1 | 0 | 5 | 586 | 15 | 593 | Os01g0100400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465266.1 | 0 | 20 | 586 | 22 | 588 | hypothetical protein SORBIDRAFT_01g035180 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 550 | 5 | 543 | A Chain A, Recombinant Horseradish Peroxidase C1a |
PDB | 1asq_A | 0 | 27 | 550 | 5 | 543 | A Chain A, Recombinant Horseradish Peroxidase C1a |
PDB | 1asp_B | 0 | 27 | 550 | 5 | 543 | A Chain A, Recombinant Horseradish Peroxidase C1a |
PDB | 1asp_A | 0 | 27 | 550 | 5 | 543 | A Chain A, Recombinant Horseradish Peroxidase C1a |
PDB | 1aso_B | 0 | 27 | 550 | 5 | 543 | A Chain A, Recombinant Horseradish Peroxidase C1a |