Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00038884m |
Family | GT43 |
Protein Properties | Length: 195 Molecular Weight: 21324.9 Isoelectric Point: 5.9285 |
Chromosome | Chromosome/Scaffold: 054396 Start: 7 End: 5436 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 1 | 188 | 0 |
MYRHIAFKPEENFTTAAAEAHAQRNAALAHVEKHRLAGVLHFADAAGVYDTGFFDQIRQIEAFGTWPVATMSAGEKKVVVEGPLCSASKVVGWFSRDFND GTTRAVTYNTETDLNPAGAAGTRVHTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSIKFVQEVVLEDRAKLKGIPSDCSQIMVWQY |
Full Sequence |
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Protein Sequence Length: 195 Download |
MYRHIAFKPE ENFTTAAAEA HAQRNAALAH VEKHRLAGVL HFADAAGVYD TGFFDQIRQI 60 EAFGTWPVAT MSAGEKKVVV EGPLCSASKV VGWFSRDFND GTTRAVTYNT ETDLNPAGAA 120 GTRVHTIDVS GFAFNSSILW DPERWGRPTS LPDTSQDSIK FVQEVVLEDR AKLKGIPSDC 180 SQIMVWQYGM PSSQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 9.0e-31 | 1 | 186 | 197 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 4.0e-53 | 1 | 188 | 191 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 1.0e-75 | 1 | 194 | 195 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE12012.1 | 0 | 1 | 193 | 85 | 277 | beta3-glucuronyltransferase [Hordeum vulgare] |
EMBL | CAE12151.1 | 0 | 1 | 193 | 60 | 252 | beta3-glucuronyltransferase [Triticum aestivum] |
EMBL | CAI93177.1 | 0 | 1 | 194 | 180 | 373 | glycosyltransferase [Saccharum officinarum] |
RefSeq | NP_001140833.1 | 0 | 1 | 194 | 172 | 365 | hypothetical protein LOC100272909 [Zea mays] |
RefSeq | XP_002439203.1 | 0 | 1 | 194 | 183 | 376 | hypothetical protein SORBIDRAFT_09g002200 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 0.00000005 | 19 | 186 | 78 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 0.00000005 | 19 | 186 | 78 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 0.00000005 | 19 | 186 | 78 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 0.00000005 | 19 | 186 | 78 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 0.0003 | 38 | 187 | 108 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL770800 | 195 | 1 | 195 | 0 |
FL870509 | 195 | 1 | 195 | 0 |
FL917965 | 195 | 1 | 195 | 0 |
FL856198 | 195 | 1 | 195 | 0 |
BJ256333 | 193 | 1 | 193 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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