| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00039074m |
| Family | AA1 |
| Protein Properties | Length: 589 Molecular Weight: 64360.4 Isoelectric Point: 6.3665 |
| Chromosome | Chromosome/Scaffold: 054621 Start: 2092 End: 4535 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 104 | 388 | 1.6e-26 |
| ATFPGPTIVARHDVPLAVTWENHLPDRHILPWDPTVPTAIPKNGGVPTVVHLHGSAHPPQADGSPFAWFTAGFRETGPAWSTPTYRYPNVQPPGNLWYHD HALGLTRANLLAGLLGAYVIEKPEVDVPMDLPCDDDDLHFVIADRSFNVDGSLYMNSTGVAPSVHPQWQPEYFGEAITVNGKAWPFLAVHRRRYRLRILN ASNARYFNVSLSNGMPFHVVGSDASYLAAPVTVSSLLISPAEIFDVVVDFAASPTAEVEMLNSAPYPFPNGTAPGPLNGKVMKFV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 589 Download |
| MGNHARMLRR VAAALVAVVV AGVAVSAQAP PPPVTSALLQ QVAASLQMYV DPLPQMAKIR 60 GYGFQQGSVV PVNLTIGMFQ KNWKFHRDLP ETPVFVYGQC AETATFPGPT IVARHDVPLA 120 VTWENHLPDR HILPWDPTVP TAIPKNGGVP TVVHLHGSAH PPQADGSPFA WFTAGFRETG 180 PAWSTPTYRY PNVQPPGNLW YHDHALGLTR ANLLAGLLGA YVIEKPEVDV PMDLPCDDDD 240 LHFVIADRSF NVDGSLYMNS TGVAPSVHPQ WQPEYFGEAI TVNGKAWPFL AVHRRRYRLR 300 ILNASNARYF NVSLSNGMPF HVVGSDASYL AAPVTVSSLL ISPAEIFDVV VDFAASPTAE 360 VEMLNSAPYP FPNGTAPGPL NGKVMKFVVT PNGPRDPPDN STVPDREVPY ANVASPGPTS 420 ETRYIAMYEY LTPSGQSTHL YINGLRLEDP VTETPRSGTT ELWHVINLTG DNHPLHIHLG 480 MFQAVKMQQL LDLQAFTDCM TQVNDAVRCG VDQHAVGPVV PVPDHEKTWK NVVKVPPGFV 540 TTVVVAFKLV DTNQPYPFDA TAEPGYVYHC HILDHEDNAM IRPLKLLP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10965 | PRK10965 | 0.0002 | 442 | 580 | 143 | + multicopper oxidase; Provisional | ||
| pfam07732 | Cu-oxidase_3 | 6.0e-12 | 105 | 227 | 130 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PRK10883 | PRK10883 | 4.0e-16 | 191 | 352 | 168 | + FtsI repressor; Provisional | ||
| PRK10965 | PRK10965 | 4.0e-23 | 101 | 354 | 265 | + multicopper oxidase; Provisional | ||
| COG2132 | SufI | 3.0e-41 | 103 | 584 | 491 | + Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB21194.1 | 0 | 34 | 587 | 34 | 587 | putative spore coat protein-like protein [Oryza sativa Japonica Group] |
| GenBank | EEC69863.1 | 0 | 34 | 587 | 34 | 559 | hypothetical protein OsI_00220 [Oryza sativa Indica Group] |
| RefSeq | NP_001041895.1 | 0 | 31 | 587 | 27 | 581 | Os01g0126100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001041899.1 | 0 | 34 | 572 | 34 | 572 | Os01g0126900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002455264.1 | 0 | 33 | 588 | 33 | 588 | hypothetical protein SORBIDRAFT_03g007440 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3zdw_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 2x88_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 2x87_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 2bhf_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 1w8e_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
