y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00039075m |
Family | GH1 |
Protein Properties | Length: 389 Molecular Weight: 44657.2 Isoelectric Point: 5.0243 |
Chromosome | Chromosome/Scaffold: 056420 Start: 2 End: 3971 |
Description | beta glucosidase 42 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 1 | 388 | 0 |
IEGARREGGKGDNIWDVFTEDKERVLDRSNGDIAVDHYHRYREDIELMASLGFRAYRFSISWARIFPDGMGGKVNEQGVAFYNNLINFMIAKGVEPYATL YHWDLPNNLQKTLGGWISEKIVDYFALYAEACFANFGDRVKRWLTINEPLQTAFNGYGIGVFAPGGCEGETARCYLAAHHQILAHAAAVDVYRRKFKAAQ GGEVGLVVDCEWAEPFSEKAEDQIAAQRRIDFQFGWFLDPIYFGDYPESMRERLGSDLPTFSEKEKEFIRNKIDFIGLNHYTSRLIAHRQNAEDVYFYQV QQVERIEKWNSGEKIGERAASEWLFIVPWGLHKLLNYIAKKYDNPAIYITENGMDEEDDQSATLEQVLNDTTRVSYFKGYLASVAQAI |
Full Sequence |
---|
Protein Sequence Length: 389 Download |
IEGARREGGK GDNIWDVFTE DKERVLDRSN GDIAVDHYHR YREDIELMAS LGFRAYRFSI 60 SWARIFPDGM GGKVNEQGVA FYNNLINFMI AKGVEPYATL YHWDLPNNLQ KTLGGWISEK 120 IVDYFALYAE ACFANFGDRV KRWLTINEPL QTAFNGYGIG VFAPGGCEGE TARCYLAAHH 180 QILAHAAAVD VYRRKFKAAQ GGEVGLVVDC EWAEPFSEKA EDQIAAQRRI DFQFGWFLDP 240 IYFGDYPESM RERLGSDLPT FSEKEKEFIR NKIDFIGLNH YTSRLIAHRQ NAEDVYFYQV 300 QQVERIEKWN SGEKIGERAA SEWLFIVPWG LHKLLNYIAK KYDNPAIYIT ENGMDEEDDQ 360 SATLEQVLND TTRVSYFKGY LASVAQAIK 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 3.0e-87 | 2 | 389 | 399 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 8.0e-96 | 2 | 389 | 404 | + beta-glucosidase | ||
COG2723 | BglB | 6.0e-104 | 1 | 388 | 395 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 8.0e-124 | 1 | 389 | 389 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 7.0e-138 | 1 | 388 | 391 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71957.1 | 0 | 1 | 389 | 30 | 418 | hypothetical protein OsI_04787 [Oryza sativa Indica Group] |
RefSeq | NP_001031975.1 | 0 | 1 | 389 | 36 | 426 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_001045089.1 | 0 | 1 | 389 | 30 | 418 | Os01g0897600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146483.1 | 0 | 1 | 389 | 30 | 418 | hypothetical protein LOC100280071 [Zea mays] |
RefSeq | XP_002456785.1 | 0 | 1 | 389 | 155 | 543 | hypothetical protein SORBIDRAFT_03g042690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 2 | 389 | 33 | 432 | A Chain A, Human Artd15PARP16 IN COMPLEX WITH 3-Aminobenzamide |
PDB | 3gnp_A | 0 | 2 | 389 | 33 | 432 | A Chain A, Human Artd15PARP16 IN COMPLEX WITH 3-Aminobenzamide |
PDB | 3gno_A | 0 | 2 | 389 | 33 | 432 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 1 | 388 | 35 | 426 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 1 | 388 | 35 | 426 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
JG798933 | 252 | 73 | 324 | 0 |
JG958633 | 249 | 137 | 385 | 0 |
FL918417 | 245 | 103 | 347 | 0 |
FL711428 | 237 | 7 | 243 | 0 |
FL711428 | 31 | 225 | 255 | 1.9 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|