| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00039153m |
| Family | GT29 |
| Protein Properties | Length: 370 Molecular Weight: 39770.4 Isoelectric Point: 9.8665 |
| Chromosome | Chromosome/Scaffold: 055067 Start: 871 End: 2220 |
| Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT29 | 131 | 346 | 0 |
| RRERFPTCAVVGNSGILLGSGRGAQIDAHHLVVRLNNARVAGYAADVGARTSLSFVNSNILHYCAVRSAVAAGGCACHPYGRAVPMAMYVCQPAHLLDAL ICNATATPASPFPLLVTDARLDALTARIAKYYSLRRFVAATGEPASNWTRRHDERYFHYSSGLQAVVMALGVCDEVSLFGFGKAAGAKHHYHTNQKKELD LHDYEAEYQFYRDLQA | |||
| Full Sequence |
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| Protein Sequence Length: 370 Download |
| MSHHAGGGGG DGDALLRRLA AADAGGDQVL AEAAALLANA SVTSFPSIAS RYRLLYLRLP 60 HRGGNGTAAP RQRAVSRLRV PFVTVPDDGP LLAAFRASLR SFLLARRPRR RDTNVAAVMG 120 DLAGGLLGRP RRERFPTCAV VGNSGILLGS GRGAQIDAHH LVVRLNNARV AGYAADVGAR 180 TSLSFVNSNI LHYCAVRSAV AAGGCACHPY GRAVPMAMYV CQPAHLLDAL ICNATATPAS 240 PFPLLVTDAR LDALTARIAK YYSLRRFVAA TGEPASNWTR RHDERYFHYS SGLQAVVMAL 300 GVCDEVSLFG FGKAAGAKHH YHTNQKKELD LHDYEAEYQF YRDLQARPET VPFLDEAPGF 360 KVPPVKLYW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 3.0e-31 | 134 | 344 | 223 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN30607.1 | 0 | 36 | 369 | 1 | 340 | unknown [Zea mays] |
| GenBank | EAY82275.1 | 0 | 12 | 368 | 44 | 395 | hypothetical protein OsI_37484 [Oryza sativa Indica Group] |
| RefSeq | NP_001066170.1 | 0 | 12 | 369 | 44 | 396 | Os12g0151500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150867.1 | 0 | 25 | 369 | 56 | 402 | sialyltransferase-like protein [Zea mays] |
| RefSeq | XP_002449004.1 | 0 | 9 | 369 | 38 | 400 | hypothetical protein SORBIDRAFT_05g003160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.000000000000005 | 138 | 325 | 100 | 262 | A Chain A, Sequencing A Protein By X-Ray Crystallography. Ii. Refinement Of Yeast Hexokinase B Co-Ordinates And Sequence At 2.1 Angstroms Resolution |
| PDB | 2wnb_A | 0.000000000000005 | 138 | 325 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.000000000000006 | 138 | 325 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CK211216 | 258 | 113 | 370 | 0 |
| FF354353 | 210 | 161 | 370 | 0 |
| CK053361 | 210 | 127 | 336 | 0 |
| BQ753087 | 184 | 187 | 370 | 0 |
| FF354354 | 176 | 195 | 370 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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