Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039198m |
Family | GH9 |
Protein Properties | Length: 522 Molecular Weight: 57187.1 Isoelectric Point: 6.0295 |
Chromosome | Chromosome/Scaffold: 056175 Start: 1654 End: 4580 |
Description | glycosyl hydrolase 9B18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 49 | 507 | 0 |
DYRDALAKSILFFEGQRSGRLPPGQRASWRGDSGVSDGAAAGVDLEGGYYDAGDNVKFGFPMAFTTTMLAWSVIEFGGDMPRDERRHAAGAVRWATDYLL KTLAHPSVIFLQVGDPWKDHDCWERPEDMDTERTVYNVSAGRPGSDIAGETAAALAAASMVFRDDDPEYAETLLASARKAFEFADTYKGAYSDDPDLRAG GCPFYCDFNGYQDELLWGAAWLRRASKDDTFLQYIQNNGKTLGAEDSSNEFGWDNKHAGLNVLVSKEFIEGEVLSLQSYKEFADSFICTLIPESSSPHIT YTPGGMLYKPGGSNMQHVTSISFLLLTYAKYLSKSSHTVDCGDISVGPATLQRQAKKQVDYLLGDNPMKMSYMIGYGDRYPQRIHHRGSSLPSIKDHPQR IACKEGTPYYNSSGANPNPLIGAVVGGPGEDDAYEDDRADFRKSEPTTYINAPLVGVLA |
Full Sequence |
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Protein Sequence Length: 522 Download |
MAPRVAPRPS SIHRLCVRIL LASFLAAHRL VPSCSASFLG FPAAAKRHDY RDALAKSILF 60 FEGQRSGRLP PGQRASWRGD SGVSDGAAAG VDLEGGYYDA GDNVKFGFPM AFTTTMLAWS 120 VIEFGGDMPR DERRHAAGAV RWATDYLLKT LAHPSVIFLQ VGDPWKDHDC WERPEDMDTE 180 RTVYNVSAGR PGSDIAGETA AALAAASMVF RDDDPEYAET LLASARKAFE FADTYKGAYS 240 DDPDLRAGGC PFYCDFNGYQ DELLWGAAWL RRASKDDTFL QYIQNNGKTL GAEDSSNEFG 300 WDNKHAGLNV LVSKEFIEGE VLSLQSYKEF ADSFICTLIP ESSSPHITYT PGGMLYKPGG 360 SNMQHVTSIS FLLLTYAKYL SKSSHTVDCG DISVGPATLQ RQAKKQVDYL LGDNPMKMSY 420 MIGYGDRYPQ RIHHRGSSLP SIKDHPQRIA CKEGTPYYNS SGANPNPLIG AVVGGPGEDD 480 AYEDDRADFR KSEPTTYINA PLVGVLAFLV GNPNPGRIRH Y* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03009 | PLN03009 | 0 | 48 | 515 | 468 | + cellulase | ||
PLN02266 | PLN02266 | 0 | 19 | 509 | 497 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 42 | 515 | 474 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 49 | 507 | 464 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 38 | 514 | 482 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70805.1 | 0 | 45 | 515 | 24 | 494 | hypothetical protein [Vitis vinifera] |
GenBank | EEE70095.1 | 0 | 48 | 520 | 40 | 516 | hypothetical protein OsJ_30098 [Oryza sativa Japonica Group] |
RefSeq | NP_001063747.1 | 0 | 48 | 520 | 40 | 515 | Os09g0530200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002275280.1 | 0 | 45 | 515 | 24 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002460560.1 | 0 | 1 | 520 | 1 | 523 | hypothetical protein SORBIDRAFT_02g030710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 48 | 510 | 3 | 429 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ksc_A | 0 | 48 | 510 | 3 | 429 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ks8_A | 0 | 48 | 510 | 3 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 49 | 510 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 49 | 510 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |