Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039239m |
Family | GH9 |
Protein Properties | Length: 540 Molecular Weight: 59480.8 Isoelectric Point: 7.9059 |
Chromosome | Chromosome/Scaffold: 057737 Start: 304 End: 3581 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 54 | 518 | 0 |
NYEDALQKSLLYFEAQRSGRLPHSQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSLIEYGGDVAAAGELGHALEAVKWGTDYF IKAHTQPDELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDHPGSDVAGETAAAMAAASIVFRNANPHYAHLLLHHAQQLFEFADKYRGKYDSSIAEVK SYYASVSGYKDELLWAALWLHRATGRAEYLDYVVDNADSFGGTGWAINEFSWDVKYAGVQILATRLLLRGEHASRHRSTLERYRAKAERYVCACLGRNAD ANVERSPGGMLYIRQWNNMQYVTSAAFLLSAYSDYLAEAGVGAVSCGEGAVAAAEVFALARAQVDYVLGTNPRGVSYLVGYGPKYPNRVHHRAASIVPYK HSKEFIGCTQGFDHWFGRRSSNPNVLVGAIVGGPDRRDRFRDNRENYMQTEACTYNTAPMVGMFA |
Full Sequence |
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Protein Sequence Length: 540 Download |
MRRRRAGGSP LAMSGVGTAS SCRRRRQQLG GALLLVLVAL AAGVLGGAEG KAHNYEDALQ 60 KSLLYFEAQR SGRLPHSQRV TWRHHSGLTD GLEQGVDLVG GYYDAGDHVK FGLPMAFTVT 120 MLSWSLIEYG GDVAAAGELG HALEAVKWGT DYFIKAHTQP DELWAEVGDG DTDHYCWQRP 180 EDMTTSRQAY KVDRDHPGSD VAGETAAAMA AASIVFRNAN PHYAHLLLHH AQQLFEFADK 240 YRGKYDSSIA EVKSYYASVS GYKDELLWAA LWLHRATGRA EYLDYVVDNA DSFGGTGWAI 300 NEFSWDVKYA GVQILATRLL LRGEHASRHR STLERYRAKA ERYVCACLGR NADANVERSP 360 GGMLYIRQWN NMQYVTSAAF LLSAYSDYLA EAGVGAVSCG EGAVAAAEVF ALARAQVDYV 420 LGTNPRGVSY LVGYGPKYPN RVHHRAASIV PYKHSKEFIG CTQGFDHWFG RRSSNPNVLV 480 GAIVGGPDRR DRFRDNRENY MQTEACTYNT APMVGMFAKL HRMARQEREQ GPTPAAAEV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 5.0e-170 | 54 | 520 | 467 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-175 | 54 | 518 | 467 | + Glycosyl hydrolase family 9. | ||
PLN02420 | PLN02420 | 0 | 54 | 537 | 485 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 50 | 539 | 493 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 49 | 524 | 476 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY87457.1 | 0 | 49 | 537 | 31 | 524 | hypothetical protein OsI_08866 [Oryza sativa Indica Group] |
RefSeq | NP_001048062.1 | 0 | 49 | 537 | 53 | 546 | Os02g0738600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151436.1 | 0 | 51 | 531 | 41 | 526 | endoglucanase 1 [Zea mays] |
Swiss-Prot | Q6Z5P2 | 0 | 49 | 537 | 31 | 524 | GUN7_ORYSJ RecName: Full=Endoglucanase 7; AltName: Full=Endo-1,4-beta glucanase 7; AltName: Full=OsGLU10; Flags: Precursor |
RefSeq | XP_002454315.1 | 0 | 49 | 539 | 61 | 562 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 52 | 507 | 2 | 415 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1ksc_A | 0 | 52 | 507 | 2 | 415 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1ks8_A | 0 | 52 | 507 | 2 | 415 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 52 | 523 | 23 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 52 | 509 | 3 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |