| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00039254m |
| Family | GT20 |
| Protein Properties | Length: 850 Molecular Weight: 94112.8 Isoelectric Point: 7.1813 |
| Chromosome | Chromosome/Scaffold: 057959 Start: 421 End: 4250 |
| Description | trehalose phosphatase/synthase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT20 | 50 | 533 | 0 |
| RRVIVSHRLPLRAAPDPAAPFGFVFTVDSGTVAYQLRSGLPASAPVLHIGTLPAAAAEAASDELSNYLLANFSCLPVYLPSDLHHRFYHGFCKHYLWPLL HYLLPLTPSSLGGLPFQRTLYHSFLSANRAFADRLTEVLSPDEDLVWIHDYHLLALPTFLRKRFPRAKVGFFLHSPFPSSEIFRTIPVRDDLVRALLNAD LVGFHTFDYARHFLSACSRLLGLDYQSKRGYIGIEYYGRTVTVKILPVGIDMGQLRSVVSAPETGDAVRRVAEAYKGRRLMIGVDDVDLFKGIGLKFLAM EQLLVDHPELRGRAVLVQITNPARSEGRDVQGVQDEARAISARVNARFGTPGYTPIVLLEGPVTPQEKAAYYAAAECCVMSAVRDGLNRIPYIYTVLRQE SDALGDDAPKRSVIVLSEFVGCSPSLSGAIRVNPWSVESVAEAMNAALRMPEAEQRLRHEKHYKYVSTHDVAYWARSFDQDLQR | |||
| Full Sequence |
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| Protein Sequence Length: 850 Download |
| MPSLSCHNLL DLAAADEVPL PSPTPLRLPR VMSVASPASP TSPSPPAPPR RVIVSHRLPL 60 RAAPDPAAPF GFVFTVDSGT VAYQLRSGLP ASAPVLHIGT LPAAAAEAAS DELSNYLLAN 120 FSCLPVYLPS DLHHRFYHGF CKHYLWPLLH YLLPLTPSSL GGLPFQRTLY HSFLSANRAF 180 ADRLTEVLSP DEDLVWIHDY HLLALPTFLR KRFPRAKVGF FLHSPFPSSE IFRTIPVRDD 240 LVRALLNADL VGFHTFDYAR HFLSACSRLL GLDYQSKRGY IGIEYYGRTV TVKILPVGID 300 MGQLRSVVSA PETGDAVRRV AEAYKGRRLM IGVDDVDLFK GIGLKFLAME QLLVDHPELR 360 GRAVLVQITN PARSEGRDVQ GVQDEARAIS ARVNARFGTP GYTPIVLLEG PVTPQEKAAY 420 YAAAECCVMS AVRDGLNRIP YIYTVLRQES DALGDDAPKR SVIVLSEFVG CSPSLSGAIR 480 VNPWSVESVA EAMNAALRMP EAEQRLRHEK HYKYVSTHDV AYWARSFDQD LQRACKDHFS 540 RRHWGIGFGM SFKVVALGPN FRRLSVEHIL PSYRRTENRL ILLDYDGTVM PENSIDKAPS 600 SEVISVLNRL CEDPKNRVFI VSGRGKDELS KWFAPCEKLG IAAEHGYFTR WSRGVPWETS 660 SLAADFDWKK TAEPVMRLYT EATDGSSIEH KESALVWHHQ EADPDFGSCQ AKELLDHLEN 720 VLANEPVVVK RGQHIVEVNP QGISKGVVVE SLLSSMVKTG KAPDLVLCIG DDRSDEDMFE 780 SIVCPSNASV RLPATSEVFA CTVGKKPSMA RYYLDDTVDV IKMLEGLANA PSQRPRPAVQ 840 LRVSFEGSL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 1.0e-144 | 118 | 830 | 743 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| cd03788 | GT1_TPS | 8.0e-167 | 50 | 532 | 483 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| pfam00982 | Glyco_transf_20 | 6.0e-172 | 50 | 533 | 487 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 9.0e-177 | 110 | 830 | 730 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| PLN02205 | PLN02205 | 0 | 50 | 833 | 793 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD19111.1 | 0 | 1 | 741 | 1 | 740 | putative alpha,alpha-trehalose-phosphate synthase [Oryza sativa Japonica Group] |
| GenBank | EAY87814.1 | 0 | 1 | 849 | 1 | 847 | hypothetical protein OsI_09233 [Oryza sativa Indica Group] |
| RefSeq | NP_001148318.1 | 0 | 1 | 828 | 1 | 830 | LOC100281927 [Zea mays] |
| RefSeq | XP_002452959.1 | 0 | 1 | 849 | 1 | 849 | hypothetical protein SORBIDRAFT_04g035560 [Sorghum bicolor] |
| RefSeq | XP_002511428.1 | 0 | 1 | 847 | 1 | 859 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 50 | 533 | 2 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 50 | 533 | 2 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 50 | 533 | 2 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 50 | 533 | 2 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 2wtx_D | 0 | 50 | 533 | 3 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777775 | 760 | 84 | 833 | 0 |
| HO779327 | 516 | 91 | 600 | 0 |
| HO779327 | 259 | 596 | 850 | 0 |
| HO797286 | 470 | 370 | 833 | 0 |
| GR281627 | 293 | 519 | 811 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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