| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00039741m |
| Family | AA1 |
| Protein Properties | Length: 611 Molecular Weight: 67449.4 Isoelectric Point: 7.6888 |
| Chromosome | Chromosome/Scaffold: 058580 Start: 1466 End: 4182 |
| Description | laccase 7 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 34 | 567 | 0 |
| AIVEHTFVVSQMNMTHLCKETPVTVVNGQIPGPSIEVTEGDSVTVHVVNKSPHNITIHWHGVKQRRNCWSDGVPMVTQCPIQPNQNFTYRFSVAGQVGTL WWHAHVSCLRATLHGAIIIRPRLGASSYPFPKPDREIPFIIVVARRMEKDNFFDYFPSASTINGKLGDLFNCSGVPEDGFVLDVEAGKSYLLRIINTALF SEYFLKIAGHKFTVVASDANYVRPYTTDLVVIAPGETIDALVVADAPPGKYYMVAMPNQAPLPDTQTPEPSTRATMQYSSSNGGKPVAPVMPDQHDVVRS LYFHSNLSSLRHPRHPLPPVPQQVDQHLFITLGLGMACRQGFKCNRDDKNDNMILVATMNNISFQKPTAPLLPAHYYHVAGSNRGDLLELPDRPPRVFNF TDPSLIPIGPKEKALETTYMATLARWFRYGSAVEMVFQSTSIMQGDSNPMHLHGHDMFVLAQGVGNFDAAKDRARYNLVDPPLKNTVVVPNLGWVAIRFV ADNPGVWYMHCHYEFHLAMGMTAVFIVEDGPTVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 611 Download |
| MQTMKSWSLP TAAAVVAATI FFSLSTMALP AASAIVEHTF VVSQMNMTHL CKETPVTVVN 60 GQIPGPSIEV TEGDSVTVHV VNKSPHNITI HWHGVKQRRN CWSDGVPMVT QCPIQPNQNF 120 TYRFSVAGQV GTLWWHAHVS CLRATLHGAI IIRPRLGASS YPFPKPDREI PFIIVVARRM 180 EKDNFFDYFP SASTINGKLG DLFNCSGVPE DGFVLDVEAG KSYLLRIINT ALFSEYFLKI 240 AGHKFTVVAS DANYVRPYTT DLVVIAPGET IDALVVADAP PGKYYMVAMP NQAPLPDTQT 300 PEPSTRATMQ YSSSNGGKPV APVMPDQHDV VRSLYFHSNL SSLRHPRHPL PPVPQQVDQH 360 LFITLGLGMA CRQGFKCNRD DKNDNMILVA TMNNISFQKP TAPLLPAHYY HVAGSNRGDL 420 LELPDRPPRV FNFTDPSLIP IGPKEKALET TYMATLARWF RYGSAVEMVF QSTSIMQGDS 480 NPMHLHGHDM FVLAQGVGNF DAAKDRARYN LVDPPLKNTV VVPNLGWVAI RFVADNPGVW 540 YMHCHYEFHL AMGMTAVFIV EDGPTVNTSL PAPPVDYPSC GRPNRKKGSL VPDESYLQTR 600 EIKASRIDGV * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02604 | PLN02604 | 3.0e-65 | 21 | 572 | 600 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 2.0e-72 | 31 | 559 | 582 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 2.0e-82 | 35 | 558 | 570 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 38 | 580 | 559 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001064399.1 | 0 | 37 | 577 | 42 | 599 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146681.1 | 0 | 37 | 563 | 42 | 585 | hypothetical protein LOC100280281 [Zea mays] |
| RefSeq | XP_002449914.1 | 0 | 11 | 581 | 5 | 594 | hypothetical protein SORBIDRAFT_05g025570 [Sorghum bicolor] |
| RefSeq | XP_002449982.1 | 0 | 33 | 563 | 29 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 28 | 580 | 23 | 593 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 33 | 558 | 1 | 521 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1asq_A | 0 | 33 | 558 | 1 | 521 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1asp_B | 0 | 33 | 558 | 1 | 521 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1asp_A | 0 | 33 | 558 | 1 | 521 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1aso_B | 0 | 33 | 558 | 1 | 521 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
