Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039824m |
Family | GH100 |
Protein Properties | Length: 489 Molecular Weight: 55222.2 Isoelectric Point: 5.0148 |
Chromosome | Chromosome/Scaffold: 058371 Start: 1130 End: 4712 |
Description | alkaline/neutral invertase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 103 | 486 | 0 |
TSSVEDEAWELLQESMVYYCGSPVGTIAANDPNDSDPVNYDQVFIRDFIPSGIAFLLKGEYEIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTI PLDGDEDATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERIDVQTGMKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEI QALFYSALLCAREMLTPEDGSADLIRALNNRLIALSFHIREYYWLDMQKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWIPPKGGYFIGNLQPAHM DFRFFSLGNLWSIVSSLATTHQSHAILDLIESKWSDLVAEMPLKICYPALENQEWKIITGSDPKNTPWSYHNGGSWPTLLWQVC |
Full Sequence |
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Protein Sequence Length: 489 Download |
MGIPEVALHT MPGAFAAHTP ASNLPLVADA RRRKRNAYLV PNVRALQGLL KFPRLRSVRR 60 QCQRIDDLAR VTEGNGNWVK DAMNNASQVL DDVGVADQAR RKTSSVEDEA WELLQESMVY 120 YCGSPVGTIA ANDPNDSDPV NYDQVFIRDF IPSGIAFLLK GEYEIVRNFI LHTLQLQSWE 180 KTMDCHSPGQ GLMPASFKVR TIPLDGDEDA TEEVLDPDFG EAAIGRVAPV DSGLWWIILL 240 RAYGKCSGDL SVQERIDVQT GMKMILKLCL ADGFDMFPTL LVTDGSCMID RRMGIHGHPL 300 EIQALFYSAL LCAREMLTPE DGSADLIRAL NNRLIALSFH IREYYWLDMQ KLNEIYRYKT 360 EEYSYDAVNK FNIYPDQIPP WLVEWIPPKG GYFIGNLQPA HMDFRFFSLG NLWSIVSSLA 420 TTHQSHAILD LIESKWSDLV AEMPLKICYP ALENQEWKII TGSDPKNTPW SYHNGGSWPT 480 LLWQVCIF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.005 | 146 | 330 | 198 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN02973 | PLN02973 | 5.0e-173 | 109 | 483 | 375 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 9.0e-180 | 109 | 485 | 377 | + beta-fructofuranosidase | ||
PLN02703 | PLN02703 | 0 | 94 | 487 | 394 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 109 | 484 | 376 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84899.1 | 0 | 1 | 487 | 1 | 502 | unknown [Zea mays] |
GenBank | EAY86114.1 | 0 | 1 | 487 | 1 | 525 | hypothetical protein OsI_07486 [Oryza sativa Indica Group] |
RefSeq | NP_001047012.1 | 0 | 1 | 487 | 1 | 507 | Os02g0529400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142296.1 | 0 | 1 | 487 | 1 | 502 | hypothetical protein LOC100274465 [Zea mays] |
RefSeq | XP_002452195.1 | 0 | 1 | 487 | 1 | 504 | hypothetical protein SORBIDRAFT_04g021550 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 388 | 100 | 487 | 0 |
GO872629 | 342 | 100 | 441 | 0 |
GO845848 | 314 | 133 | 446 | 0 |
GO855285 | 318 | 100 | 417 | 0 |
GO845848 | 20 | 446 | 465 | 0.15 |
Sequence Alignments (This image is cropped. Click for full image.) |
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