Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039897m |
Family | GH9 |
Protein Properties | Length: 508 Molecular Weight: 54130.7 Isoelectric Point: 8.4828 |
Chromosome | Chromosome/Scaffold: 055882 Start: 2318 End: 4200 |
Description | cellulase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 46 | 499 | 0 |
DYADALGKAILFFQGQRSGQLPPDQVVTWRSNSGLSDGSAANVDLTGGYYDGGDNAKFGFPMAFTTTMLSWSVLEHGGRMKARVRDARAAVRWGADYLLK AATQTPGALYVGVGDPDADHRCWERPEDMDTPRTVYAVSASAPGSDVAGETAAALAAASMVFRAADPAYSRRLLAAARDVMELAVRNQGKYSDVIGGNIG AYYQSYSGYKDELLWGSAWLLWATKNSSYLGYLYSLGDNDSVDMFSWDNKLAGARVLLSRRALVNGDKALEPFRQQAEDFFCRILPGSPSSTTRYTAGGL MHKSGDANLQYVASASFLLATYAKYMAVSRHTFSCQGLAVGPKSLRALARKQVDYILGANPQGMSYMVNFGARWPQRIHHRASSLPSVASHPARIGCQEG YQSYFYSGAANPNVHTGAVVGGPDENDAFPDDRADYARSEPTTYTNAPLVGCLA |
Full Sequence |
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Protein Sequence Length: 508 Download |
MGSASASSNR AALAPRPSAR ALVLVAGLVV SLLSACSHVA AGGHPDYADA LGKAILFFQG 60 QRSGQLPPDQ VVTWRSNSGL SDGSAANVDL TGGYYDGGDN AKFGFPMAFT TTMLSWSVLE 120 HGGRMKARVR DARAAVRWGA DYLLKAATQT PGALYVGVGD PDADHRCWER PEDMDTPRTV 180 YAVSASAPGS DVAGETAAAL AAASMVFRAA DPAYSRRLLA AARDVMELAV RNQGKYSDVI 240 GGNIGAYYQS YSGYKDELLW GSAWLLWATK NSSYLGYLYS LGDNDSVDMF SWDNKLAGAR 300 VLLSRRALVN GDKALEPFRQ QAEDFFCRIL PGSPSSTTRY TAGGLMHKSG DANLQYVASA 360 SFLLATYAKY MAVSRHTFSC QGLAVGPKSL RALARKQVDY ILGANPQGMS YMVNFGARWP 420 QRIHHRASSL PSVASHPARI GCQEGYQSYF YSGAANPNVH TGAVVGGPDE NDAFPDDRAD 480 YARSEPTTYT NAPLVGCLAY LAGAYKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 1.0e-167 | 39 | 503 | 469 | + endoglucanase | ||
PLN03009 | PLN03009 | 2.0e-173 | 46 | 502 | 464 | + cellulase | ||
PLN02266 | PLN02266 | 0 | 46 | 505 | 464 | + endoglucanase | ||
PLN02175 | PLN02175 | 0 | 45 | 504 | 460 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 39 | 502 | 468 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE01493.1 | 0 | 43 | 507 | 35 | 500 | P0041A24.5 [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC75164.1 | 0 | 41 | 507 | 42 | 509 | hypothetical protein OsI_11382 [Oryza sativa Indica Group] |
RefSeq | NP_001052888.1 | 0 | 43 | 507 | 38 | 503 | Os04g0443300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002269875.1 | 0 | 43 | 507 | 28 | 492 | PREDICTED: similar to Cel9B [Vitis vinifera] |
RefSeq | XP_002447897.1 | 0 | 4 | 507 | 3 | 515 | hypothetical protein SORBIDRAFT_06g017600 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 46 | 501 | 4 | 428 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ksc_A | 0 | 46 | 501 | 4 | 428 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ks8_A | 0 | 46 | 501 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 46 | 505 | 5 | 444 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 46 | 505 | 5 | 444 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |