Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039903m |
Family | CE10 |
Protein Properties | Length: 332 Molecular Weight: 34695.7 Isoelectric Point: 6.0737 |
Chromosome | Chromosome/Scaffold: 054205 Start: 2715 End: 3710 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 59 | 329 | 0 |
HSRDVDLGASSVRLYLPPVADGAGKLPVVVYVHGGGFVAESAASPNYHLFLNRLAAACPALGVSVDYRLAPEHPLPAGYDDCLAALKWALSAADPWVAAH GDLGRVFVAGDSAGANICHHLTMHPDVRGHAAAAAAPGRAPLKGAVMIHPWFWGSEAVGEEPRDPAFRAMGAGLWFFACPGNSDMDDPRMNPMAPGAPGL GALACERVMVCAAEGDFLRWRGRAYAEAVAAARGGGVELLETMGEGHVFYLFKPDCDKAKEMLDKMVAFIN |
Full Sequence |
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Protein Sequence Length: 332 Download |
MASSNSALPN FPVPPPADPA DEVVREFGPL LRVYKSGRVE RPLVAPPVAP GHDAATGVHS 60 RDVDLGASSV RLYLPPVADG AGKLPVVVYV HGGGFVAESA ASPNYHLFLN RLAAACPALG 120 VSVDYRLAPE HPLPAGYDDC LAALKWALSA ADPWVAAHGD LGRVFVAGDS AGANICHHLT 180 MHPDVRGHAA AAAAPGRAPL KGAVMIHPWF WGSEAVGEEP RDPAFRAMGA GLWFFACPGN 240 SDMDDPRMNP MAPGAPGLGA LACERVMVCA AEGDFLRWRG RAYAEAVAAA RGGGVELLET 300 MGEGHVFYLF KPDCDKAKEM LDKMVAFINA P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 3.0e-9 | 78 | 187 | 123 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 2.0e-13 | 72 | 226 | 180 | + Carboxylesterase family. | ||
cd00312 | Esterase_lipase | 1.0e-14 | 72 | 226 | 168 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG0657 | Aes | 1.0e-24 | 25 | 251 | 233 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-38 | 87 | 309 | 226 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY86351.1 | 0 | 17 | 329 | 7 | 316 | hypothetical protein OsI_07729 [Oryza sativa Indica Group] |
RefSeq | NP_001047179.1 | 0 | 17 | 329 | 7 | 313 | Os02g0567800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148459.1 | 0 | 9 | 331 | 6 | 334 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001150025.1 | 0 | 1 | 331 | 1 | 332 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002452312.1 | 0 | 1 | 331 | 1 | 341 | hypothetical protein SORBIDRAFT_04g023520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 9e-36 | 39 | 328 | 32 | 327 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 2o7r_A | 9e-36 | 39 | 328 | 32 | 327 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 4e-29 | 84 | 330 | 112 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 4e-29 | 84 | 330 | 112 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 4e-29 | 84 | 330 | 112 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE015724 | 254 | 25 | 278 | 0 |
EE016167 | 254 | 25 | 278 | 0 |
EE162211 | 242 | 37 | 278 | 0 |
EE162210 | 242 | 37 | 278 | 0 |
EE159603 | 242 | 37 | 278 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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