| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00040168m |
| Family | AA5 |
| Protein Properties | Length: 594 Molecular Weight: 65609 Isoelectric Point: 4.7962 |
| Chromosome | Chromosome/Scaffold: 054052 Start: 16 End: 4727 |
| Description | |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA5 | 314 | 553 | 9.8e-23 |
| VGGCDGFSLLPSLDSFSPSLDILTPLKPMAVGKSYASTVALDNKIFVLGGGDGACWFDTVDCYDPRRDDWTTCPPLSRDKGSLAGVSVNGRIYAFGGGDG SECFPDVEIFDPSLGKWIKNRPMLERRFALAGVELNGVIYAVGGFNSVQYLSSAERLDPREPNWKMLPTMNAGRGCHTLAVLDEKIFSIGGYDNGAKAMV ATVEMYEPRMPSWVMVEPMNHTRGYHSSAVLGGSIFTFGG | |||
| Full Sequence |
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| Protein Sequence Length: 594 Download |
| MPGVPGQKLH FFQFELDHAQ THVLMEMFTP SPPPNNFWKP SAAAPADEHV SELISSPVWA 60 PECERNNDLK SEKVVKSYAD MVRKNKFEEV GTGDVDAERA SSGNESSNGF DDLDCGNTPP 120 EREEHELSDK AVEVQKQLQS GRQEKVLSIN WEFQRYKMLS ARARRWNSDC CANAAETKDN 180 EAYSSKYAQE VTYTILDGHS NLPETLDTEL NQLSWGHSNL LVQLLDSESC TEAKLIEIVK 240 ELSGRIEAME KKQAWSNKEV KHLQGVNERL LKRIVELKGT VKTLNSKIDP LTLDDSLNQF 300 VEQCLGSEDV IYLVGGCDGF SLLPSLDSFS PSLDILTPLK PMAVGKSYAS TVALDNKIFV 360 LGGGDGACWF DTVDCYDPRR DDWTTCPPLS RDKGSLAGVS VNGRIYAFGG GDGSECFPDV 420 EIFDPSLGKW IKNRPMLERR FALAGVELNG VIYAVGGFNS VQYLSSAERL DPREPNWKML 480 PTMNAGRGCH TLAVLDEKIF SIGGYDNGAK AMVATVEMYE PRMPSWVMVE PMNHTRGYHS 540 SAVLGGSIFT FGGVKGEADT ILDVVERYKE GCGWVTTGLK SIGRRCYCSA IVL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PHA03098 | PHA03098 | 9.0e-5 | 487 | 571 | 85 | + kelch-like protein; Provisional | ||
| pfam01344 | Kelch_1 | 1.0e-9 | 347 | 390 | 44 | + Kelch motif. The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. | ||
| PHA03098 | PHA03098 | 3.0e-27 | 351 | 583 | 237 | + kelch-like protein; Provisional | ||
| PHA03098 | PHA03098 | 5.0e-28 | 303 | 529 | 235 | + kelch-like protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC65044.1 | 0 | 1 | 593 | 143 | 726 | Kelch-like protein [Oryza sativa Japonica Group] |
| GenBank | EEC82210.1 | 0 | 1 | 593 | 144 | 727 | hypothetical protein OsI_26354 [Oryza sativa Indica Group] |
| GenBank | EEE67342.1 | 0 | 1 | 593 | 144 | 727 | hypothetical protein OsJ_24601 [Oryza sativa Japonica Group] |
| RefSeq | NP_001159315.1 | 0 | 225 | 593 | 315 | 676 | hypothetical protein LOC100304407 [Zea mays] |
| RefSeq | XP_002441688.1 | 0 | 2 | 593 | 144 | 732 | hypothetical protein SORBIDRAFT_08g000780 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4in4_C | 7e-34 | 310 | 568 | 17 | 274 | A Chain A, Crystal Structure Of Cpd 15 Bound To Keap1 Kelch Domain |
| PDB | 4in4_C | 8e-19 | 311 | 494 | 115 | 298 | A Chain A, Crystal Structure Of Cpd 15 Bound To Keap1 Kelch Domain |
| PDB | 4in4_C | 0.000000000004 | 310 | 440 | 161 | 291 | A Chain A, Crystal Structure Of Cpd 15 Bound To Keap1 Kelch Domain |
| PDB | 4in4_C | 0.000000001 | 403 | 556 | 15 | 170 | A Chain A, Crystal Structure Of Cpd 15 Bound To Keap1 Kelch Domain |
| PDB | 4in4_B | 7e-34 | 310 | 568 | 17 | 274 | A Chain A, Crystal Structure Of Cpd 15 Bound To Keap1 Kelch Domain |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO278777 | 226 | 338 | 563 | 0 |
| JG912801 | 259 | 244 | 502 | 0 |
| FL744852 | 220 | 371 | 588 | 0 |
| JG912801 | 189 | 405 | 592 | 0.0000000003 |
| JG912801 | 107 | 451 | 557 | 0.0001 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Oryza sativa | LOC_Os07g35610.1 | ||||
| Picea abies | MA_158504g0230 | ||||
| Setaria italica | Si009476m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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