| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00040432m |
| Family | GT8 |
| Protein Properties | Length: 558 Molecular Weight: 64337.4 Isoelectric Point: 7.1361 |
| Chromosome | Chromosome/Scaffold: 057293 Start: 1441 End: 5104 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 227 | 529 | 0 |
| CLNMRLTVEYFKSTPLDPDDSPAHKFNIPEHRHYVILSKNVLAASVVINSTVSSCEDTENVVFHILTDAQNFYAMKHWFARNSYRESAVDVINYEQIIFE NFPEFGTQLLYLPEEFRVFISNLERPTEKSRMEYLSVFSHSHFFIPEIFKDLRKVIILDNDVVVQRDLSFLWNLDMGDKVNGAVRFCGLKLGQLRNLLGR TIYDPQSCAWMSGVNVIDLDKWREHNVTENYLQLLRKFGNNDDEASLRAAALPISLLSFQHLLYPLDERLTLSGLGYDYGIKEEVAQSSASLHYNGNMKP WLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| NASNKISGSS KDSQNAIDDD PSSISTKPKV LPPPKIEQPV LPPPKVEQPK PEVKPVRLPV 60 QQAEGDRVNI RPRRVQNADE VEKAKSCQLE FGSYCLWSIE HKEVMRDAVV KRLKDQLFVA 120 RSYYPSVAKL KGKEALTREL KQNIQEHERV LSESIVDADL PSFIKKKIER MDQSIARAKS 180 CTVDCNNVDR KLRQILHMTE DEAHFHMKQS AYLYNLGVHT MPKSHHCLNM RLTVEYFKST 240 PLDPDDSPAH KFNIPEHRHY VILSKNVLAA SVVINSTVSS CEDTENVVFH ILTDAQNFYA 300 MKHWFARNSY RESAVDVINY EQIIFENFPE FGTQLLYLPE EFRVFISNLE RPTEKSRMEY 360 LSVFSHSHFF IPEIFKDLRK VIILDNDVVV QRDLSFLWNL DMGDKVNGAV RFCGLKLGQL 420 RNLLGRTIYD PQSCAWMSGV NVIDLDKWRE HNVTENYLQL LRKFGNNDDE ASLRAAALPI 480 SLLSFQHLLY PLDERLTLSG LGYDYGIKEE VAQSSASLHY NGNMKPWLEL GIPDYKKYWK 540 RFLTRDERFM DECNVSP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02718 | PLN02718 | 2.0e-92 | 103 | 555 | 465 | + Probable galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 9.0e-93 | 259 | 544 | 286 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02910 | PLN02910 | 3.0e-93 | 92 | 556 | 487 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 3.0e-109 | 104 | 557 | 468 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 4 | 556 | 555 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89863.1 | 0 | 12 | 555 | 95 | 629 | hypothetical protein OsI_11412 [Oryza sativa Indica Group] |
| GenBank | EAZ26795.1 | 0 | 12 | 555 | 95 | 629 | hypothetical protein OsJ_10706 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050007.1 | 0 | 12 | 557 | 95 | 631 | Os03g0330000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151802.1 | 0 | 17 | 557 | 86 | 629 | transferase, transferring glycosyl groups [Zea mays] |
| RefSeq | XP_002465323.1 | 0 | 1 | 557 | 69 | 628 | hypothetical protein SORBIDRAFT_01g036430 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.0004 | 339 | 453 | 66 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.0007 | 339 | 453 | 66 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.0007 | 339 | 453 | 66 | 169 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| JG937944 | 259 | 300 | 558 | 0 |
| FL858410 | 252 | 252 | 503 | 0 |
| CA096921 | 235 | 82 | 316 | 0 |
| GT760224 | 250 | 74 | 323 | 0 |
| EG397314 | 255 | 225 | 479 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
