Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00040471m |
Family | GH5 |
Protein Properties | Length: 400 Molecular Weight: 44587.5 Isoelectric Point: 5.2186 |
Chromosome | Chromosome/Scaffold: 060030 Start: 1304 End: 3566 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 61 | 374 | 2.2e-26 |
PFIVHGFNTYWLVYLAADPAARPAVTAAFAEAAGAGLNVCRTWAFNDGGYRALQLKPFSYDEALDFVISEAIKYKVRLIQSLCNNWNDYGGKPQYVRWGK EAGLDLTSDDDFFSDPTIKSYYKASVEDDPTILAWELINEPRCHSDPSGDTLQAWIEEMASYVKSIDTLHLLEIGVEGFYGPSTPEHLHVNPDAYSGTVG TDFIRNHRALGIDLASVHIYSDNWLPHTVEENHLQFVKTWMQQHIDNAANLLEMPILIWEFGVSLKDGKFGHKFREPFMDTVYNIFLSSWKSGVIGGGCV VWQLFPQNAEHMDN |
Full Sequence |
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Protein Sequence Length: 400 Download |
MEAPGSGMCL AASALQQVTP RVSLLHCLLL AASMSLTPPP GADEWAVVER RGPHLWASER 60 PFIVHGFNTY WLVYLAADPA ARPAVTAAFA EAAGAGLNVC RTWAFNDGGY RALQLKPFSY 120 DEALDFVISE AIKYKVRLIQ SLCNNWNDYG GKPQYVRWGK EAGLDLTSDD DFFSDPTIKS 180 YYKASVEDDP TILAWELINE PRCHSDPSGD TLQAWIEEMA SYVKSIDTLH LLEIGVEGFY 240 GPSTPEHLHV NPDAYSGTVG TDFIRNHRAL GIDLASVHIY SDNWLPHTVE ENHLQFVKTW 300 MQQHIDNAAN LLEMPILIWE FGVSLKDGKF GHKFREPFMD TVYNIFLSSW KSGVIGGGCV 360 VWQLFPQNAE HMDNGYVVIF AKSPSTLKLL AKHSRSLEY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 2.0e-16 | 96 | 324 | 239 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ19452.1 | 0 | 47 | 398 | 1 | 368 | hypothetical protein OsJ_35013 [Oryza sativa Japonica Group] |
GenBank | EEC67554.1 | 0 | 45 | 398 | 9 | 378 | hypothetical protein OsI_34887 [Oryza sativa Indica Group] |
GenBank | EEE52650.1 | 0 | 45 | 398 | 9 | 381 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
Swiss-Prot | Q2RBB1 | 0 | 45 | 398 | 9 | 378 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
RefSeq | XP_002450155.1 | 0 | 38 | 398 | 2 | 383 | hypothetical protein SORBIDRAFT_05g001260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 52 | 397 | 11 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 1e-36 | 51 | 323 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 1e-36 | 51 | 323 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 1e-36 | 51 | 323 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 1e-36 | 51 | 323 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX593159 | 210 | 189 | 398 | 0 |
BG367536 | 211 | 188 | 398 | 0 |
CA270579 | 189 | 210 | 398 | 0 |
CO521251 | 189 | 211 | 398 | 0 |
CB624099 | 200 | 199 | 398 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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