Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00040685m |
Family | GT14 |
Protein Properties | Length: 403 Molecular Weight: 45404.1 Isoelectric Point: 9.5799 |
Chromosome | Chromosome/Scaffold: 059591 Start: 188 End: 4698 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 56 | 310 | 0 |
LAYLITGAGPGDGPRIRRLLRALYHPWNCYLVGVAGEDDRADLEAFVRGQEAPRRYGNVRVADAGEWGAVSRRGPTELAATLHAAAVLLREFEGWSWFIN LSASDYPLMPQDDILHIFSYIPRDLNFIDHTSNIGWKEYQRARPIIVDPALQVPNKTEVITTKEKRSLPSAFKIFVGSSWVVLSRSFLEFCLLGWDNLPR TLLMYFTNFLSSSEGYFHTVICNSEYYQNTTINSDLRFMAWDNPPRTHPVNLTTE |
Full Sequence |
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Protein Sequence Length: 403 Download |
MRKLPPAHRL RWMRALLLAL PLLSLPILYA VLGAARSSPP GRPPQQQQRR RPPPRLAYLI 60 TGAGPGDGPR IRRLLRALYH PWNCYLVGVA GEDDRADLEA FVRGQEAPRR YGNVRVADAG 120 EWGAVSRRGP TELAATLHAA AVLLREFEGW SWFINLSASD YPLMPQDDIL HIFSYIPRDL 180 NFIDHTSNIG WKEYQRARPI IVDPALQVPN KTEVITTKEK RSLPSAFKIF VGSSWVVLSR 240 SFLEFCLLGW DNLPRTLLMY FTNFLSSSEG YFHTVICNSE YYQNTTINSD LRFMAWDNPP 300 RTHPVNLTTE HFDSMANSGA PFAHSFTNDS PVLDMIDTKL LGRATDRFTP GGWCLGSSVG 360 GKDPCTFIGR SFVLRPTKGS AKLEELLLKL LEHDNFRPKQ CK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-53 | 56 | 316 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-118 | 57 | 402 | 349 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95263.1 | 0 | 53 | 401 | 54 | 401 | glycosyltransferase family 14 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEE58795.1 | 0 | 143 | 401 | 1 | 259 | hypothetical protein OsJ_10333 [Oryza sativa Japonica Group] |
RefSeq | NP_001049716.1 | 0 | 53 | 359 | 54 | 359 | Os03g0276900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152358.1 | 0 | 1 | 402 | 1 | 406 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
RefSeq | XP_002465469.1 | 0 | 1 | 402 | 1 | 414 | hypothetical protein SORBIDRAFT_01g039410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000006 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000006 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000006 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000006 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000002 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |