| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00040687m |
| Family | GH9 |
| Protein Properties | Length: 553 Molecular Weight: 61655.3 Isoelectric Point: 9.4849 |
| Chromosome | Chromosome/Scaffold: 058009 Start: 629 End: 4320 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 111 | 552 | 0 |
| DYTVALHKALMFFNAQRSGKLPKHNNVPWRGNSCMKDGLSDPAVRRSLVGGYYDAGDAVKLNFPAAFSMTLLSWSVIEYSAKYEAVGELDHVRDIIKWGA DYFLKTFNSTADSIDRVVVQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAAALAAASIVFKDNKAYSQKLVHGAATLFQFARDRRGRYSAGSSDAAK LYNSTGYWDEFVWGSSWMYLATGNSSYLTLATNPKLAKHAGAFWGGPDYGVFSWDNKLAGAQVLLSRLRLFLSPGYPYEEMLRTFHNQTSIIMCSYLPIF KSFNRTKGGLIQLNHGKPRSLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEVLRSFARTQIEYILGKNPLKMSYVVGFGKHYPKHVHHRGASIPK NGVHYGCKGGWKWRDTKKPNPNIIVGAMVAGPDRHDGFKDAR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 553 Download |
| MSMYGRDPWG GPLEICHDSA TDDDRSRNLD IDRGALSRTL DETQQSWLLA GPGDQGRRRK 60 KYLDIGCLVV SRKFFVWTLG VLLAAAVFAG VVAGIAKAIP RRHRPPPPPD DYTVALHKAL 120 MFFNAQRSGK LPKHNNVPWR GNSCMKDGLS DPAVRRSLVG GYYDAGDAVK LNFPAAFSMT 180 LLSWSVIEYS AKYEAVGELD HVRDIIKWGA DYFLKTFNST ADSIDRVVVQ PNDHYCWMRP 240 EDIDYPRPVV ECHACSDLAA EMAAALAAAS IVFKDNKAYS QKLVHGAATL FQFARDRRGR 300 YSAGSSDAAK LYNSTGYWDE FVWGSSWMYL ATGNSSYLTL ATNPKLAKHA GAFWGGPDYG 360 VFSWDNKLAG AQVLLSRLRL FLSPGYPYEE MLRTFHNQTS IIMCSYLPIF KSFNRTKGGL 420 IQLNHGKPRS LQYVVNAAFL ASVFSDYLEA ADTPGWYCGP HFYSIEVLRS FARTQIEYIL 480 GKNPLKMSYV VGFGKHYPKH VHHRGASIPK NGVHYGCKGG WKWRDTKKPN PNIIVGAMVA 540 GPDRHDGFKD AR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 4.0e-107 | 111 | 552 | 456 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-107 | 111 | 552 | 458 | + endoglucanase | ||
| PLN02613 | PLN02613 | 6.0e-110 | 110 | 552 | 454 | + endoglucanase | ||
| PLN02345 | PLN02345 | 2.0e-139 | 115 | 552 | 446 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 4.0e-156 | 111 | 552 | 449 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36366.1 | 0 | 1 | 552 | 1 | 564 | unknown [Zea mays] |
| GenBank | EEE58992.1 | 0 | 1 | 552 | 1 | 564 | hypothetical protein OsJ_10702 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050004.1 | 0 | 1 | 552 | 1 | 564 | Os03g0329500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147537.1 | 0 | 1 | 552 | 1 | 564 | endo-1,4-beta-glucanase [Zea mays] |
| RefSeq | XP_002465324.1 | 0 | 1 | 552 | 1 | 565 | hypothetical protein SORBIDRAFT_01g036480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 111 | 552 | 4 | 405 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ksc_A | 0 | 111 | 552 | 4 | 405 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ks8_A | 0 | 111 | 552 | 4 | 405 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 108 | 552 | 2 | 417 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 108 | 552 | 2 | 417 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
