Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00040732m |
Family | GH3 |
Protein Properties | Length: 503 Molecular Weight: 54912.3 Isoelectric Point: 9.9865 |
Chromosome | Chromosome/Scaffold: 055646 Start: 99 End: 1964 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 124 | 359 | 0 |
LKTRLGIPIIYGIDAVHGNNNVYNATIFPHNVGLGATRDPNLVKRVGDATAHEARATGIPYTFAPCVAVCRDPRWGRCYESYSEDTRLVQLMTSSMVTGL QGDVPSKHPKGVPFVGGAKKVAGCAKHFVGDGGTQRGINENNTVLSFHDLMRIHMPPYDNAVIKGISTVMISYSSFNGVKMHENKFLITDTLKNKMNFRG FVITDWQAVDRITNPPHTHYYHSIEETIHAGIDMVM |
Full Sequence |
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Protein Sequence Length: 503 Download |
MRSSRFVSST MARGSSPAAA VACLLVTAVL LPAAVAAEKP KAEYVKYKDP KQPINERIDD 60 LLNRMTLEEK IGQMSQIERA NATTEVIEKY FVGSVLSGGG SVPSEKATAS AWQKMVAAMQ 120 KAALKTRLGI PIIYGIDAVH GNNNVYNATI FPHNVGLGAT RDPNLVKRVG DATAHEARAT 180 GIPYTFAPCV AVCRDPRWGR CYESYSEDTR LVQLMTSSMV TGLQGDVPSK HPKGVPFVGG 240 AKKVAGCAKH FVGDGGTQRG INENNTVLSF HDLMRIHMPP YDNAVIKGIS TVMISYSSFN 300 GVKMHENKFL ITDTLKNKMN FRGFVITDWQ AVDRITNPPH THYYHSIEET IHAGIDMVMI 360 PYDYPEFVAD VVKQVKAGQI RLDRVNDAVS RILRVKFAMG LFEDPLPDPR LAKELGSKEH 420 RAIAREAVRK SLVLLKNSKK GGGHKDQPGM LPLSKNAKKV LVAGTHAHDL GNQCGGWTIK 480 WQGERGNNLT GAGTTILEAI KKA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-10 | 432 | 503 | 72 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 8.0e-31 | 53 | 478 | 460 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 1.0e-63 | 50 | 462 | 431 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 1.0e-86 | 66 | 395 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 1.0e-91 | 65 | 503 | 449 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY91867.1 | 0 | 43 | 503 | 29 | 483 | hypothetical protein OsI_13514 [Oryza sativa Indica Group] |
RefSeq | NP_001051274.1 | 0 | 43 | 503 | 36 | 490 | Os03g0749100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001051275.1 | 0 | 28 | 501 | 8 | 473 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105671.1 | 0 | 42 | 503 | 22 | 479 | beta-glucanase [Zea mays] |
RefSeq | XP_002466456.1 | 0 | 15 | 503 | 4 | 483 | hypothetical protein SORBIDRAFT_01g008050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 43 | 503 | 1 | 454 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1x38_A | 0 | 43 | 503 | 1 | 454 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1lq2_A | 0 | 43 | 503 | 1 | 454 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 43 | 503 | 1 | 454 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 43 | 503 | 1 | 454 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |