| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00041023m |
| Family | GT43 |
| Protein Properties | Length: 303 Molecular Weight: 33484.2 Isoelectric Point: 10.4293 |
| Chromosome | Chromosome/Scaffold: 037432 Start: 4877 End: 6261 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT43 | 112 | 296 | 0 |
| AHALRLVSPPVLWLVVEAAREAPPTATLLRRTGVVYRHLTYTDNLTSDAWEEERHHQRNVALGHIEQHRLHGVVFFAGLADVYDLRLLEQLRRIRTLGAW PVATVWEQERRVAIQGPLCSSGGAAASAWFSAPTTTTSGAGGGFSRPTPPLTSDDSVHGFAFASDLLWDPARWDRFPTTEPDQSQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 303 Download |
| MASPKHHNSK QATNKTKKKR PLLLRRAMLH SCLCFLLGLL TGLAPSDWAD AANAQVFRAV 60 RAINHTAALL QLKTTARYLE EPHHPQLLLV VTTTTGLSPE RERRSAALTR TAHALRLVSP 120 PVLWLVVEAA REAPPTATLL RRTGVVYRHL TYTDNLTSDA WEEERHHQRN VALGHIEQHR 180 LHGVVFFAGL ADVYDLRLLE QLRRIRTLGA WPVATVWEQE RRVAIQGPLC SSGGAAASAW 240 FSAPTTTTSG AGGGFSRPTP PLTSDDSVHG FAFASDLLWD PARWDRFPTT EPDQSQVRFA 300 SL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 4.0e-24 | 120 | 280 | 171 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 2.0e-31 | 120 | 296 | 181 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 2.0e-41 | 118 | 296 | 179 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG39763.1 | 0 | 1 | 296 | 1 | 328 | hypothetical protein [Zea mays] |
| RefSeq | NP_001060738.1 | 0 | 1 | 299 | 1 | 304 | Os07g0694400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132861.1 | 0 | 1 | 296 | 1 | 330 | hypothetical protein LOC100194354 [Zea mays] |
| RefSeq | XP_002463447.1 | 0 | 1 | 296 | 1 | 338 | hypothetical protein SORBIDRAFT_02g044020 [Sorghum bicolor] |
| RefSeq | XP_002468048.1 | 0 | 1 | 296 | 1 | 315 | hypothetical protein SORBIDRAFT_01g038640 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.000000006 | 101 | 216 | 14 | 141 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v84_A | 0.000000006 | 101 | 216 | 14 | 141 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v83_B | 0.000000006 | 101 | 216 | 14 | 141 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v83_A | 0.000000006 | 101 | 216 | 14 | 141 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v82_B | 0.000000006 | 101 | 216 | 14 | 141 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
