| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00041095m |
| Family | GH116 |
| Protein Properties | Length: 635 Molecular Weight: 71756.3 Isoelectric Point: 5.2776 |
| Chromosome | Chromosome/Scaffold: 037093 Start: 621 End: 5094 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 213 | 574 | 0 |
| GQFLYLEGIEYYMWNTYDVHFYASFSLVMLFPKLQLSVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGAVPHDLGLCDPWFKVNAYTLYNTDRWKDLNP KFVLQVYRDVVATGDKSFARAVWPSVYMAMAYMEQFDKDKDGMIENEDFPDQTYDVWSMAGISAYCGGLWVAALQAASALAREVGDKASEKLFWDKYEKA KSVYSKLWNGSYFNYDDGDNKMSTSIQADQLAGQWYANACGLFPIVDKDKAQSALERIYSFNVMKFKDGTRGAMNGMWPDGTLDMSAMQSREIWPGVTYA LAATMIQEGMVEQGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 635 Download |
| HGSFDHLDPI KTPMGSKPGS SIGAAIAASL KIAPKATQDV SFSLAWACPE VKFSSGKTYH 60 RVKQLNLHSM FCRRYTKFYG TDVDAAASLA RDAVLEHTSW ERLIEEWQDP ILQDTRFPAW 120 YPVTLFNELY YLNAGGTIWT DGLPPIQSLT GIGGKKFSLD MLNDDDVNEM VQQNNTASDI 180 LNRMASVLER MHASIASNSA IGTTLLHGEE NIGQFLYLEG IEYYMWNTYD VHFYASFSLV 240 MLFPKLQLSV QRDFAAAVMM HDPEKLRILH DGKWAARKVL GAVPHDLGLC DPWFKVNAYT 300 LYNTDRWKDL NPKFVLQVYR DVVATGDKSF ARAVWPSVYM AMAYMEQFDK DKDGMIENED 360 FPDQTYDVWS MAGISAYCGG LWVAALQAAS ALAREVGDKA SEKLFWDKYE KAKSVYSKLW 420 NGSYFNYDDG DNKMSTSIQA DQLAGQWYAN ACGLFPIVDK DKAQSALERI YSFNVMKFKD 480 GTRGAMNGMW PDGTLDMSAM QSREIWPGVT YALAATMIQE GMVEQGFKTA EGIYHAAWSP 540 EGLGYSFQTP EAWNNDDEYR SLCYMRPLAI WAMQWALSNP KLHNTPQTDI PQDSSPKTQI 600 SYARIAKLLQ LPEDESSKSF VRVVYEIIWN RFRS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12215 | GBA2_N | 0.0006 | 37 | 103 | 67 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-5 | 37 | 141 | 105 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 3.0e-76 | 212 | 577 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-170 | 213 | 575 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX95400.1 | 0 | 1 | 634 | 309 | 931 | At5g49900 [Oryza sativa Japonica Group] |
| GenBank | EEC67936.1 | 0 | 1 | 634 | 328 | 950 | hypothetical protein OsI_35656 [Oryza sativa Indica Group] |
| RefSeq | NP_001067588.1 | 0 | 1 | 634 | 328 | 950 | Os11g0242100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002275782.1 | 0 | 1 | 632 | 339 | 963 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002450573.1 | 0 | 1 | 634 | 328 | 951 | hypothetical protein SORBIDRAFT_05g007160 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 359 | 226 | 581 | 0 |
| GR335547 | 268 | 118 | 383 | 0 |
| CB622732 | 267 | 104 | 368 | 0 |
| DT947783 | 265 | 313 | 577 | 0 |
| JG703027 | 328 | 231 | 558 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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