| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00041326m |
| Family | GT50 |
| Protein Properties | Length: 446 Molecular Weight: 50861.4 Isoelectric Point: 10.0319 |
| Chromosome | Chromosome/Scaffold: 036701 Start: 2794 End: 5470 |
| Description | mannosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT50 | 133 | 421 | 0 |
| IGTRGNCEPIVCAAMLWILICLMKGRVLQAAFWYGLIVHFRIYPIIYAIPFVIVLGKSYACPSGRPTLTMWNSEQHLQNDKASQRGGPTSVLAILWDFLS NFITRNAILFGLFSGFMFFAWTGVFFYLYGWDFLNEALLYHLTRTDPRHNFSIYFYHIYLHHQQGFSSIQRLASFLPQLIVQLALITRFSRDLPFCMFLQ TVAFVAFNKVMTAQYFVWFFCLLPLTLPWSSMNLKWKGLACMLVWMGSQLHWLMWAYLLEFKGRNVFVQLWVAGLVFLAANTFVMLMVI | |||
| Full Sequence |
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| Protein Sequence Length: 446 Download |
| MASAAGSAVT LRRVLLASAA LRLALVVFGE WQDAHLEVRY TDVDYLVFSD AAASVAAGGS 60 PFARATYRYS PLLAFLLLPN SLLHAAWGKL LFSAADLLVG LFIDTILKLR GIPEKMRMWS 120 VIAWLFNPFT FTIGTRGNCE PIVCAAMLWI LICLMKGRVL QAAFWYGLIV HFRIYPIIYA 180 IPFVIVLGKS YACPSGRPTL TMWNSEQHLQ NDKASQRGGP TSVLAILWDF LSNFITRNAI 240 LFGLFSGFMF FAWTGVFFYL YGWDFLNEAL LYHLTRTDPR HNFSIYFYHI YLHHQQGFSS 300 IQRLASFLPQ LIVQLALITR FSRDLPFCMF LQTVAFVAFN KVMTAQYFVW FFCLLPLTLP 360 WSSMNLKWKG LACMLVWMGS QLHWLMWAYL LEFKGRNVFV QLWVAGLVFL AANTFVMLMV 420 IKQHKYTPLF LSPVKPGRKV ATKKE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06728 | PIG-U | 0.0002 | 90 | 288 | 215 | + GPI transamidase subunit PIG-U. Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the carboxyl-terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI. | ||
| pfam05007 | Mannosyl_trans | 6.0e-69 | 133 | 421 | 291 | + Mannosyltransferase (PIG-M). PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates. | ||
| PLN02841 | PLN02841 | 0 | 28 | 445 | 418 | + GPI mannosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005789 | endoplasmic reticulum membrane |
| GO:0006506 | GPI anchor biosynthetic process |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG32572.1 | 0 | 4 | 445 | 2 | 443 | PNT1 [Zea mays] |
| GenBank | EEC75897.1 | 0 | 5 | 445 | 2 | 444 | hypothetical protein OsI_12951 [Oryza sativa Indica Group] |
| RefSeq | NP_001050869.1 | 0 | 5 | 445 | 2 | 444 | Os03g0670200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132411.1 | 0 | 4 | 445 | 2 | 443 | hypothetical protein LOC100193858 [Zea mays] |
| RefSeq | XP_002461964.1 | 0 | 1 | 445 | 1 | 443 | hypothetical protein SORBIDRAFT_02g011300 [Sorghum bicolor] |
