Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041735m |
Family | GH17 |
Protein Properties | Length: 365 Molecular Weight: 38575.2 Isoelectric Point: 8.3626 |
Chromosome | Chromosome/Scaffold: 0167678 Start: 36 End: 1308 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 24 | 346 | 0 |
IGVNYGANADNLPSPAAVATFLAAKTTVNRVKLFDANPAFLDAFAANAPGISIAVSIPNAALTGFADRAAGLDAARGWVRDNLAAHVARGANVTLLLAGN EILGPTVVPDLVVALLPAMRRLSQALQLEGLPQVRVTTPHYLGILAPSDGIPSNARFRPGLDTKVLAPMLRFHNDTGSPLMVNAYPYFSYNAQNLNYAIF RPNAGVYDPATKLNYTSMFDAQMDAIYTAMKKLGYGDVQIAVGEAGWPTQADAGQVGVGPEEARDFNAGMIRVCSGGKGTPLMPGRTFETYVFSLFDENQ KPGPIAERNFGIFNPDFTPKYDL |
Full Sequence |
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Protein Sequence Length: 365 Download |
MLPLLLLLAT AALAAAQGLP PLPIGVNYGA NADNLPSPAA VATFLAAKTT VNRVKLFDAN 60 PAFLDAFAAN APGISIAVSI PNAALTGFAD RAAGLDAARG WVRDNLAAHV ARGANVTLLL 120 AGNEILGPTV VPDLVVALLP AMRRLSQALQ LEGLPQVRVT TPHYLGILAP SDGIPSNARF 180 RPGLDTKVLA PMLRFHNDTG SPLMVNAYPY FSYNAQNLNY AIFRPNAGVY DPATKLNYTS 240 MFDAQMDAIY TAMKKLGYGD VQIAVGEAGW PTQADAGQVG VGPEEARDFN AGMIRVCSGG 300 KGTPLMPGRT FETYVFSLFD ENQKPGPIAE RNFGIFNPDF TPKYDLGLRD GSSLRKGGNV 360 TRFQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 7.0e-68 | 24 | 346 | 331 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79258.1 | 0 | 13 | 357 | 14 | 354 | unknown [Zea mays] |
GenBank | ACG36515.1 | 0 | 15 | 357 | 18 | 355 | glucan endo-1,3-beta-glucosidase precursor [Zea mays] |
RefSeq | NP_001141385.1 | 0 | 13 | 357 | 14 | 354 | hypothetical protein LOC100273476 [Zea mays] |
Swiss-Prot | P52409 | 0 | 20 | 354 | 22 | 353 | E13B_WHEAT RecName: Full=Glucan endo-1,3-beta-glucosidase; AltName: Full=(1- |
RefSeq | XP_002451320.1 | 0 | 10 | 348 | 17 | 356 | hypothetical protein SORBIDRAFT_05g027690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 24 | 346 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 24 | 346 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 1.4013e-45 | 23 | 348 | 2 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 1.4013e-45 | 23 | 348 | 2 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur7_B | 1.4013e-45 | 23 | 348 | 2 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |