y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041749m |
Family | CE10 |
Protein Properties | Length: 323 Molecular Weight: 34640.7 Isoelectric Point: 6.5129 |
Chromosome | Chromosome/Scaffold: 017226 Start: 8597 End: 9565 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 42 | 300 | 0 |
VPGVRWKDAVYDATRGLKVRVYRPPPPGAGGEEGSKLPVLVYFHGGGYCVGSYDHPMFHSCCQRFAAELPAVVLSVQYRLAPEHRLPAAVEDAATFFAWL RGQADPWLAESADLARTFVSGVSAGANLAHHVVVRLAARQLAADPVRVAGYVLLSAFFGSVERTVTEAESPASVSLTAAVDKLWRMALPVGASRDHPLAN PFGPDSPSMEPLPLPPALVVAPGLDMLRGHMRRYAARLEEMGKAVELVEFAGEQHGFSV |
Full Sequence |
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Protein Sequence Length: 323 Download |
MSSDAAPHVV EDLFGVVRLL SDGSVVRGDE SVLMPAGPFP DVPGVRWKDA VYDATRGLKV 60 RVYRPPPPGA GGEEGSKLPV LVYFHGGGYC VGSYDHPMFH SCCQRFAAEL PAVVLSVQYR 120 LAPEHRLPAA VEDAATFFAW LRGQADPWLA ESADLARTFV SGVSAGANLA HHVVVRLAAR 180 QLAADPVRVA GYVLLSAFFG SVERTVTEAE SPASVSLTAA VDKLWRMALP VGASRDHPLA 240 NPFGPDSPSM EPLPLPPALV VAPGLDMLRG HMRRYAARLE EMGKAVELVE FAGEQHGFSV 300 RGWGEANDEL VRILKRFVGQ MK* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 5.0e-6 | 77 | 124 | 48 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 1.0e-6 | 76 | 123 | 48 | + Carboxylesterase family. | ||
PRK10162 | PRK10162 | 3.0e-10 | 80 | 170 | 92 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 7.0e-28 | 29 | 317 | 291 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-49 | 81 | 298 | 220 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF82397.1 | 0 | 1 | 318 | 1 | 328 | unknown [Zea mays] |
RefSeq | NP_001042057.1 | 0 | 2 | 318 | 25 | 352 | Os01g0153800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148081.1 | 0 | 1 | 318 | 1 | 328 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002455176.1 | 0 | 1 | 318 | 1 | 335 | hypothetical protein SORBIDRAFT_03g005570 [Sorghum bicolor] |
RefSeq | XP_002455178.1 | 0 | 1 | 322 | 1 | 321 | hypothetical protein SORBIDRAFT_03g005590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 1.4013e-45 | 34 | 298 | 52 | 327 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_E | 1.4013e-45 | 34 | 298 | 52 | 327 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_D | 1.4013e-45 | 34 | 298 | 52 | 327 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_C | 1.4013e-45 | 34 | 298 | 52 | 327 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_B | 1.4013e-45 | 34 | 298 | 52 | 327 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL821289 | 237 | 1 | 233 | 0 |
CT846193 | 291 | 6 | 285 | 0 |
DV029843 | 243 | 1 | 229 | 0 |
EE295886 | 223 | 3 | 212 | 0 |
DV520621 | 241 | 1 | 227 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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