| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00041812m |
| Family | GT8 |
| Protein Properties | Length: 683 Molecular Weight: 77217.2 Isoelectric Point: 9.4732 |
| Chromosome | Chromosome/Scaffold: 016573 Start: 1414 End: 5798 |
| Description | galacturonosyltransferase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 340 | 655 | 0 |
| CLSMQLTIDYYLLPLEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESF HRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNKNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDG AAVVHYNGNMKPWLEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 683 Download |
| MPTPKQRAPY STAGGGGGGR RGASGSGVLP PVVVLVFLFV VAPSLFFVVR SGGRGHVHVA 60 SDPKVRNGNQ EAVAMMNLKS ILPKEVIDAI AASQQEAGTL SLDFFRNHES PSWKTDDLVT 120 DNGMYADDKA KAENSAAEHD LPTNKSPKDL DGHQVDTAAK IARRKLREKR REKRAMDLLS 180 KDDEARVKLE NAAIERSKAV DSAVLGKYSI WRKENENENS DTTVRLIRDQ IIMARVYSAL 240 AKSKNKSGLF QELQTRIKES QRAVGEAAAD ADLHHSAPEK IRAMGQVLSK AREEVYDCRA 300 ITQRLRAMLQ SADEQVRSLK KQSTFLSQLA AKTIPNSIHC LSMQLTIDYY LLPLEKRKFP 360 RSENLENPSL YHYALFSDNV LAASVVVNST IMNAKEPEKH VFHLVTDKLN FGAMNMWFLL 420 NPPGKATIHV ENVDEFKWLN SSYCPVLRQL ESAAMKEYYF KADRPTTLSA GSSNLKYRNP 480 KYLSMLNHLR FYLPEVYPKL DKILFLDDDI VVQKDLTGLW DVDLNGKVNG AVETCGESFH 540 RFDKYLNFSN PHIARNFDPN ACGWAYGMNI FDLKEWKKKD ITGIYHKWQN KNEDRVLWKL 600 GTLPPGLLTF YKLTHPLDKS WHVLGLGYNP SIDRSEIDGA AVVHYNGNMK PWLELAMTKY 660 RPYWTKYIKY DHPYIRGCNL SE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02910 | PLN02910 | 0 | 178 | 682 | 505 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 180 | 680 | 505 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 219 | 681 | 468 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 225 | 679 | 460 | + galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 220 | 682 | 466 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38820.1 | 0 | 70 | 682 | 64 | 681 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC84934.1 | 0 | 55 | 682 | 58 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
| RefSeq | NP_001063757.1 | 0 | 55 | 682 | 58 | 695 | Os09g0531900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002272447.1 | 0 | 70 | 682 | 112 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
| RefSeq | XP_002462717.1 | 0 | 1 | 682 | 1 | 683 | hypothetical protein SORBIDRAFT_02g030820 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.000002 | 479 | 652 | 75 | 252 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1g9r_A | 0.000002 | 479 | 652 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.00002 | 479 | 608 | 75 | 196 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
