Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041823m |
Family | GH17 |
Protein Properties | Length: 282 Molecular Weight: 30476.5 Isoelectric Point: 9.6893 |
Chromosome | Chromosome/Scaffold: 0172076 Start: 84 End: 1026 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 11 | 221 | 0 |
LALVPAMRNLHTALVAATLHGRIKVSTTHSLGVLTTTEQPSAARFRDGYDTAIVKPLLRFLRATGAPFMVNAYPFYGLTSDTLDFALFRVNAGVMDEGSG LVYSNMLDAQLDAVHSAIRRLGFGDVDIAVTETGWPSAGEDWELGVGADLARDYNKKAIRHLGSGVGTPLMPNRTFEVSIFSLFDENLKPGPVSQRNFGL FRGDMTPVYDA |
Full Sequence |
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Protein Sequence Length: 282 Download |
VTTEANRTLL LALVPAMRNL HTALVAATLH GRIKVSTTHS LGVLTTTEQP SAARFRDGYD 60 TAIVKPLLRF LRATGAPFMV NAYPFYGLTS DTLDFALFRV NAGVMDEGSG LVYSNMLDAQ 120 LDAVHSAIRR LGFGDVDIAV TETGWPSAGE DWELGVGADL ARDYNKKAIR HLGSGVGTPL 180 MPNRTFEVSI FSLFDENLKP GPVSQRNFGL FRGDMTPVYD AGIFTAPEVG VRRSSRSSGG 240 GDGRRGTGVG EDDGGLMQRW QRRRPVATPS RWRFPSLSAP F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 5.0e-62 | 12 | 220 | 215 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ86292.1 | 0 | 1 | 228 | 873 | 1106 | H0124B04.9 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC78268.1 | 0 | 1 | 228 | 569 | 802 | hypothetical protein OsI_17962 [Oryza sativa Indica Group] |
RefSeq | NP_001151529.1 | 0 | 1 | 228 | 123 | 351 | LOC100285163 [Zea mays] |
RefSeq | XP_002448791.1 | 0 | 1 | 245 | 125 | 377 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
RefSeq | XP_002526252.1 | 0 | 1 | 249 | 125 | 372 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 3e-40 | 13 | 220 | 105 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 9e-38 | 15 | 219 | 111 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 9e-38 | 15 | 219 | 111 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 9e-38 | 15 | 219 | 111 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 9e-38 | 15 | 219 | 111 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CA110861 | 185 | 46 | 228 | 0 |
CA112398 | 185 | 46 | 228 | 0 |
EG486110 | 223 | 1 | 223 | 0 |
EG484764 | 224 | 1 | 224 | 0 |
EG484761 | 224 | 1 | 224 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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