Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041862m |
Family | GT31 |
Protein Properties | Length: 355 Molecular Weight: 39982.5 Isoelectric Point: 8.1114 |
Chromosome | Chromosome/Scaffold: 0168370 Start: 1 End: 2570 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 130 | 327 | 0 |
KRRDSIRQTWMPQGDQLRRLEEKGAVIRFVIGRSENPNPNNEVDRAIDAEDKEYHDILRLNHVEGYGGLPMKIQMFLSTALTTWDADFYVKVDDNVHVNI GITRSILARHRMKPRVYIGCMKSGPVVAKNDSKYYEPDHWKFGTDGNNYFRHATRQLYAVTRDLATYISANRHILHKYSNEDVSFGSWLIGLEVEHVD |
Full Sequence |
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Protein Sequence Length: 355 Download |
MMAAAAALRP HKAPPARVPT RWVAALCAAC FLLGVCVVNR YWPVPEHPGC PDKASSDLSR 60 AALNQVSQTR EVIMALDKTI SDIEMRLAAA RAAQAMSQGM SPSDSEGDQG IMRHRMSFVM 120 GVFTTFANRK RRDSIRQTWM PQGDQLRRLE EKGAVIRFVI GRSENPNPNN EVDRAIDAED 180 KEYHDILRLN HVEGYGGLPM KIQMFLSTAL TTWDADFYVK VDDNVHVNIG ITRSILARHR 240 MKPRVYIGCM KSGPVVAKND SKYYEPDHWK FGTDGNNYFR HATRQLYAVT RDLATYISAN 300 RHILHKYSNE DVSFGSWLIG LEVEHVDERS LCCDCEWKAQ AGNPCGASFD WNCTG 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 5.0e-11 | 112 | 336 | 240 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam13334 | DUF4094 | 2.0e-22 | 19 | 87 | 83 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 8.0e-47 | 130 | 327 | 204 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 1.0e-137 | 18 | 355 | 368 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85316.1 | 0 | 2 | 355 | 1 | 361 | unknown [Zea mays] |
GenBank | ACN27226.1 | 0 | 74 | 355 | 1 | 318 | unknown [Zea mays] |
GenBank | EEE67938.1 | 0 | 1 | 355 | 1 | 361 | hypothetical protein OsJ_25826 [Oryza sativa Japonica Group] |
RefSeq | NP_001060857.1 | 0 | 1 | 355 | 1 | 361 | Os08g0116900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002444929.1 | 0 | 2 | 355 | 1 | 358 | hypothetical protein SORBIDRAFT_07g001590 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG886440 | 257 | 99 | 355 | 0 |
JG925913 | 264 | 96 | 355 | 0 |
JG955052 | 238 | 118 | 355 | 0 |
DR796054 | 271 | 17 | 284 | 0 |
CO455852 | 275 | 48 | 320 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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