Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00041877m |
Family | GT14 |
Protein Properties | Length: 184 Molecular Weight: 20987.9 Isoelectric Point: 8.1938 |
Chromosome | Chromosome/Scaffold: 0166221 Start: 943 End: 2150 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 1 | 76 | 4e-28 |
MLTKSFLEYCIWGWDNLPRNLLMYYVNFISSPEGYFQTVICNSNDFRGTAVSHDLHYIAWDYPPKQHPLILSMKDF |
Full Sequence |
---|
Protein Sequence Length: 184 Download |
MLTKSFLEYC IWGWDNLPRN LLMYYVNFIS SPEGYFQTVI CNSNDFRGTA VSHDLHYIAW 60 DYPPKQHPLI LSMKDFNKMV KSGAPFARKF PKDDKVLDKI DRELLHRLEG RFTPGAWCDG 120 SSEGGADPCL SRGEDSVFEP GPGAERLRGL MKKVLSWDYR NGSCSSLAYD QTKRDWYVPK 180 SKG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-19 | 1 | 80 | 84 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-76 | 2 | 155 | 154 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28920.1 | 0 | 1 | 165 | 168 | 331 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ41491.1 | 0 | 1 | 183 | 267 | 449 | hypothetical protein OsJ_26015 [Oryza sativa Japonica Group] |
RefSeq | NP_001060977.1 | 0 | 1 | 183 | 284 | 466 | Os08g0143500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147601.1 | 0 | 1 | 183 | 300 | 482 | xylosyltransferase 2 [Zea mays] |
RefSeq | XP_002443840.1 | 0 | 46 | 183 | 295 | 432 | hypothetical protein SORBIDRAFT_07g003140 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FL731464 | 184 | 1 | 184 | 0 |
FL902983 | 184 | 1 | 184 | 0 |
FL731465 | 184 | 1 | 184 | 0 |
FL887935 | 184 | 1 | 184 | 0 |
FL887936 | 184 | 1 | 184 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|